The SPHN RDF Schema

URI	`https://schemascope.dcc.sib.swiss/`
Description	Interactive tool to inspect the RDF Schema and its properties. Please note that not all details are included, consult pyLODE for full details of individual concepts.
Preview

Classes ↑

Access Device
Access Device Presence
Administrative Case
Administrative Sex
Admission
Adverse Event
Age
Allergen
Allergy
Allergy Episode
Antimicrobial Susceptibility Lab Test
Antimicrobial Susceptibility Lab Test Event
Antimicrobial Susceptibility Result
Assay
Assessment
Assessment Component
Assessment Event
Assessment Result
Billed Diagnosis
Billed Procedure
Biobanksample
Birth
Birth Date
Blood Pressure
Blood Pressure Measurement
Body Height
Body Height Measurement
Body Mass Index
Body Position
Body Site
Body Surface Area
Body Temperature
Body Temperature Measurement
Body Weight
Body Weight Measurement
Cardiac Index
Cardiac Output
Cardiac Output Measurement
Care Handling
Chromosomal Location
Chromosome
Circumference
Circumference Measurement
Civil Status
Code
Consent
Copy Number Variation
Country
Data Determination
Data File
Data Processing
Data Provider
Data Release
Death
Death Date
Department
Diagnosis
Discharge
Drug
Drug Administration Event
Drug Article
Drug Prescription
Electrocardiogram
Electrocardiographic Procedure
Excluded Disorder
Exposure
Fluid Balance
Fluid Input Output
Follow Up
Fraction Of Inspired Oxygen
Gene
Gene Fusion
Gene Panel
Genomic Deletion
Genomic Delins
Genomic Duplication
Genomic Insertion
Genomic Inversion
Genomic Position
Genomic Translocation
Genomic Transposition
Genomic Variation
Gestational Age At Birth
Hash
Healthcare Encounter
Healthcare Primary Information System
Heart Rate
Heart Rate Measurement
Home Address
Imaging Procedure
Implant
Implant Presence
Insurance Status
Intent
Interpretation
Isolate
Lab Analyzer
Lab Result
Lab Test
Lab Test Event
Laterality
Library Preparation
Location
Measurement
Medical Device
Medical Procedure
Microbiology Biomolecule Presence Lab Test
Microbiology Biomolecule Presence Lab Test Event
Microbiology Biomolecule Presence Result
Microbiology Microscopy Lab Test
Microbiology Microscopy Lab Test Event
Microbiology Microscopy Result
Microorganism Identification Lab Test
Microorganism Identification Lab Test Event
Microorganism Identification Result
Nationality
Nucleotide Sequence
Nursing Diagnosis
Nutrition Intake
Oncology Diagnosis
Oncology Surgery
Organ Support
Organism
Oxygen Administration Event
Oxygen Saturation
Oxygen Saturation Measurement
Performer
Pharmaceutical Dose Form
Physiologic State
Problem Condition
Protein
Quality Control Metric
Quantity
Radiotherapy Procedure
Range
Reference Interpretation
Reference Interpretation Result
Reference Range
Reference Sequence
Reference Value
Respiratory Rate
Respiratory Rate Measurement
Result
Resuscitation Directive
SPHN Concept
Sample
Sample Processing
Semantic Mapping
Sequencing Analysis
Sequencing Assay
Sequencing Instrument
Sequencing Run
Single Nucleotide Variation
Software
Source Data
Source System
Standard Operating Procedure
Subject Pseudo Identifier
Substance
Swiss Socio Economic Position
Terminology
Therapeutic Area
Time Pattern
Time Series Data File
Tobacco Exposure
Transcript
Transplant
Transplant Presence
Tumor Grade Assessment
Tumor Grade Assessment Event
Tumor Grade Assessment Result
Tumor Specimen
Tumor Stage Assessment
Tumor Stage Assessment Event
Tumor Stage Assessment Result
Unit
Variant Descriptor
Variant Notation
Vital Status

Access Device ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AccessDevice`
Description	product intended for medical use to gain access to the body, such as cannula, tube, catheter or drainage
Schema representation
Parents	Medical Device^c
	has product code^op	0 .. 1	Code^c or Terminology^c
	has type code^op	0 .. 1		Yes
	has software^op	0 .. *	Software^c

Restrictions	has type code^op : descendants of the given classes are allowed SNOMED 12150006 \| Cannula, device (physical object) \|^c SNOMED 19923001 \| Catheter, device (physical object) \|^c SNOMED 83059008 \| Tube, device (physical object) \|^c
Used in (In the range of)	has medical device^op

Access Device Presence ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AccessDevicePresence`
Description	presence of a medical access device, such as cannula, tube, catheter or drainage
Schema representation
Parents	SPHN Concept^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has resting point^op	0 .. 1	Body Site^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	0 .. 1	xsd:dateTime^c
	has insertion point^op	0 .. 1	Body Site^c
	has medical device^op	1 .. 1	Access Device^c

Restrictions	None

Administrative Case ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AdministrativeCase`
Description	administrative artifact for billing according to national healthcare billing guidelines, e.g. Swiss Diagnosis Related Groups, and local settings
Schema representation
Parents	SPHN Concept^c
	has care handling^op	0 .. 1	Care Handling^c
	has admission^op	1 .. 1	Admission^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has identifier^dp	0 .. 1	xsd:string^c
	has discharge^op	0 .. 1	Discharge^c
	has source system^op	1 .. *	Source System^c

Restrictions	None
Used in (In the range of)	has administrative case^op

Administrative Sex ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AdministrativeSex`
Description	the sex of the individual used for administrative purposes
Schema representation
Parents	SPHN Concept^c
	has code^op	1 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has record datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has code^op : descendants of the given classes are not allowed SNOMED 32570681000036106 \| Indeterminate sex (finding) \|^c SNOMED 248153007 \| Male (finding) \|^c SNOMED 248152002 \| Female (finding) \|^c

Admission ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Admission`
Description	admission of a patient to the healthcare provider institute
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 305056002 \| Admission procedure (procedure) \|^c
Parents	SPHN Concept^c
	has origin location^op	0 .. 1	Location^c
	has datetime^dp	1 .. 1	xsd:dateTime^c

Restrictions	None
Used in (In the range of)	has admission^op

Adverse Event ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AdverseEvent`
Description	results from an intervention that caused unintentional harm
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 281647001 \| Adverse reaction (disorder) \|^c
Parents	SPHN Concept^c
	has outcome^op	0 .. 1	Adverse Event outcome^c
	has intervention^dp	0 .. 1	xsd:string^c
	has code^op	1 .. 1	Code^c
	has severity code^op	0 .. 1	Terminology^c or Code^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has consequences^op	0 .. 1	Adverse Event consequences^c
	has onset datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	None
Notes	sphn:hasSeverityCode allowed coding system: CTCAE or other sphn:hasCode allowed coding system: MedDRA

Restrictions

None

Notes

sphn:hasSeverityCode allowed coding system: CTCAE or other

sphn:hasCode allowed coding system: MedDRA

Age ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Age`
Description	time elapsed since birth of the individual
Schema representation
Meaning binding (Equivalent-classes)	LOINC 30525-0 \| Age \|^c SNOMED 397669002 \| Age (qualifier value) \|^c
Parents	SPHN Concept^c
	has quantity^op	1 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has determination datetime^dp	1 .. 1	xsd:dateTime^c

Restrictions	has quantity^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM mo \| mo \|^c UCUM wk \| wk \|^c UCUM a \| a \|^c UCUM h \| h \|^c UCUM min \| min \|^c UCUM d \| d \|^c
Used in (In the range of)	has subject age^op

Allergen ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Allergen`
Description	any substance, product or physical force producing immediate hypersensitivity
Schema representation
Parents	SPHN Concept^c
	has code^op	1 .. *	Yes

Restrictions	has code^op : descendants of the given classes are allowed sphn-atc:ATC^c Code^c SNOMED 138875005 \| SNOMED CT Concept (SNOMED RT+CTV3) \|^c
Notes	sphn:hasCode allowed coding system: SNOMED CT, ATC, GTIN
Used in (In the range of)	has allergen^op

Allergy ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Allergy`
Description	risk of harmful or undesirable, physiological response which is unique to an individual and associated with exposure to an allergen
Schema representation
Parents	SPHN Concept^c
	has first record datetime^dp	0 .. 1	xsd:dateTime^c
	has reaction type code^op	0 .. 1		Yes
	has verification status code^op	0 .. 1		Yes
	has severity code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has allergen^op	0 .. 1	Allergen^c
	has last reaction datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has reaction type code^op : descendants of the given classes are not allowed SNOMED 609328004 \| Allergic disposition (finding) \|^c SNOMED 782197009 \| Intolerance to substance (finding) \|^c has verification status code^op : descendants of the given classes are not allowed SNOMED 410605003 \| Confirmed present (qualifier value) \|^c SNOMED 723510000 \| Entered in error (qualifier value) \|^c SNOMED 723511001 \| Refuted (qualifier value) \|^c SNOMED 415684004 \| Suspected (qualifier value) \|^c has severity code^op : descendants of the given classes are not allowed SNOMED 723509005 \| High risk (qualifier value) \|^c SNOMED 723505004 \| Low risk (qualifier value) \|^c SNOMED 723507007 \| Unable to determine risk (qualifier value) \|^c

Allergy Episode ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AllergyEpisode`
Description	manifestation of an allergic reaction following an exposure to an allergen
Schema representation
Parents	SPHN Concept^c
	has source system^op	1 .. *	Source System^c
	has exposure^op	0 .. 1	Exposure^c
	has manifestation code^op	0 .. 1		Yes
	has body site^op	0 .. 1	Body Site^c
	has allergen^op	1 .. 1	Allergen^c
	has duration^op	0 .. 1	Quantity^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has severity code^op	0 .. 1		Yes
	has certainty code^op	0 .. 1		Yes

Restrictions	has manifestation code^op : descendants of the given classes are allowed SNOMED 404684003 \| Clinical finding (finding) \|^c has severity code^op : descendants of the given classes are not allowed SNOMED 24484000 \| Severe (severity modifier) (qualifier value) \|^c SNOMED 255604002 \| Mild (qualifier value) \|^c SNOMED 6736007 \| Moderate (severity modifier) (qualifier value) \|^c has certainty code^op : descendants of the given classes are not allowed SNOMED 410605003 \| Confirmed present (qualifier value) \|^c SNOMED 410592001 \| Probably present (qualifier value) \|^c SNOMED 415684004 \| Suspected (qualifier value) \|^c
Notes	For sphn:hasExposure, instances of sphn:TobaccoExposure are not allowed

Antimicrobial Susceptibility Lab Test ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AntimicrobialSusceptibilityLabTest`
Description	specific lab test performed on an isolate against a chemical agent for determining antimicrobial susceptibility
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 14788002 \| Antimicrobial susceptibility test (procedure) \|^c
Parents	Lab Test^c
	has instrument^op	0 .. 1	Lab Analyzer^c
	has code^op	1 .. 1		Yes
	has test kit^op	0 .. 1	Lab Analyzer^c
	has chemical agent^op	1 .. 1	Substance^c or Drug^c
	has result^op	1 .. *	Antimicrobial Susceptibility Result^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 14788002 \| Antimicrobial susceptibility test (procedure) \|^c
Used in (In the range of)	has lab test^op

Antimicrobial Susceptibility Lab Test Event ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AntimicrobialSusceptibilityLabTestEvent`
Description	occurrence in which one or multiple laboratory tests are performed on an isolate at a given time for determining antimicrobial susceptibility
Schema representation
Parents	Lab Test Event^c
	has report datetime^dp	0 .. 1	xsd:dateTime^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has lab test^op	1 .. *	Antimicrobial Susceptibility Lab Test^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has sample^op	1 .. 1	Isolate^c

Restrictions	None

Antimicrobial Susceptibility Result ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AntimicrobialSusceptibilityResult`
Description	result of an antimicrobial susceptibility lab analysis
Schema representation
Parents	Lab Result^c
	has numerical reference^op	0 .. 1	Reference Value^c or Reference Range^c
	has quantity^op	0 .. 1	Quantity^c
	has code^op	0 .. 1		Yes
	has string value^dp	0 .. 1	xsd:string^c
	has standard guideline^dp	0 .. 1	xsd:string^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 1306540001 \| European Committee on Antimicrobial Susceptibility Testing category 2019 (qualifier value) \|^c
Used in (In the range of)	has result^op

Assay ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Assay`
Description	a process with the objective to produce information about a sample by examining it
Schema representation
Meaning binding (Equivalent-classes)	OBI 0000070 \| assay \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Sequencing Assay^c

	Cardinality	Class or Datatype	Restriction
has standard operating procedure^op	0 .. *	Standard Operating Procedure^c
has sample^op	0 .. *	Sample^c
has subject pseudo identifier^op	0 .. *	Subject Pseudo Identifier^c
has data file^op	0 .. *	Data File^c
has code^op	1 .. 1		Yes
has identifier^dp	0 .. 1	xsd:string^c
has administrative case^op	0 .. *	Administrative Case^c
has source system^op	1 .. *	Source System^c
has start datetime^dp	0 .. 1	xsd:dateTime^c
has predecessor^op	0 .. *	Sample Processing^c

Restrictions	has code^op : descendants of the given classes are allowed Code^c Terminology^c OBI 0000070 \| assay \|^c
Notes	sphn:hasCode allowed coding system: EFO, OBI or other
Used in (In the range of)	has predecessor^op

Assessment ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Assessment`
Description	assessment scale, classification, staging or scoring system
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 254291000 \| Staging and scales (staging scale) \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Tumor Stage Assessment^c Tumor Grade Assessment^c

	Cardinality	Class or Datatype	Restriction
has code^op	0 .. 1		Yes
has range^op	0 .. 1	Range^c
has component^op	0 .. *	Assessment Component^c
has name^dp	0 .. 1	xsd:string^c
has result^op	0 .. 1	Assessment Result^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 254291000 \| Staging and scales (staging scale) \|^c SNOMED 71388002 \| Procedure (procedure) \|^c sphn-loinc:LOINC^c SNOMED 363787002 \| Observable entity (observable entity) \|^c
Notes	sphn:hasCode allowed coding system: SNOMED CT, LOINC For sphn:hasResult, instances of sphn:TumorStageAssessmentResult, sphn:TumorGradeAssessmentResult are not allowed For sphn:hasRange, instances of sphn:ReferenceRange are not allowed
Used in (In the range of)	has assessment^op

Restrictions

has code^op : descendants of the given classes are allowed

Notes

sphn:hasCode allowed coding system: SNOMED CT, LOINC

For sphn:hasResult, instances of sphn:TumorStageAssessmentResult, sphn:TumorGradeAssessmentResult are not allowed

For sphn:hasRange, instances of sphn:ReferenceRange are not allowed

Used in
(In the range of)

has assessment^op

Assessment Component ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AssessmentComponent`
Description	component of an assessment
Schema representation
Parents	SPHN Concept^c
	has result^op	0 .. *	Assessment Result^c
	has name^dp	0 .. 1	xsd:string^c
	has code^op	0 .. 1		Yes
	has range^op	0 .. 1	Range^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 71388002 \| Procedure (procedure) \|^c sphn-loinc:LOINC^c SNOMED 363787002 \| Observable entity (observable entity) \|^c
Notes	sphn:hasCode allowed coding system: SNOMED CT, LOINC For sphn:hasRange, instances of sphn:ReferenceRange are not allowed For sphn:hasResult, instances of sphn:TumorStageAssessmentResult, sphn:TumorGradeAssessmentResult are not allowed
Used in (In the range of)	has component^op

Restrictions

has code^op : descendants of the given classes are allowed

SNOMED 71388002 | Procedure (procedure) |^c sphn-loinc:LOINC^c SNOMED 363787002 | Observable entity (observable entity) |^c

Notes

sphn:hasCode allowed coding system: SNOMED CT, LOINC

For sphn:hasRange, instances of sphn:ReferenceRange are not allowed

For sphn:hasResult, instances of sphn:TumorStageAssessmentResult, sphn:TumorGradeAssessmentResult are not allowed

Used in
(In the range of)

has component^op

Assessment Event ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AssessmentEvent`
Description	evaluation at a given time, which takes into account a predefined scale, classification, staging or scoring system
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 386053000 \| Evaluation procedure (procedure) \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Tumor Stage Assessment Event^c Tumor Grade Assessment Event^c

	Cardinality	Class or Datatype
has datetime^dp	1 .. 1	xsd:dateTime^c
has assessment^op	1 .. 1	Assessment^c
has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
has administrative case^op	0 .. 1	Administrative Case^c
has performer^op	0 .. 1	Performer^c
has source system^op	1 .. *	Source System^c

Restrictions	None
Notes	For sphn:hasAssessment, instances of sphn:TumorStageAssessment, sphn:TumorGradeAssessment are not allowed

Assessment Result ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#AssessmentResult`
Description	outcome of an assessment
Schema representation
Parents	Result^c
Children (Sub-classes)	Tumor Stage Assessment Result^c Tumor Grade Assessment Result^c

	Cardinality	Class or Datatype
has code^op	0 .. 1	Terminology^c or Code^c
has string value^dp	0 .. 1	xsd:string^c
has quantity^op	0 .. 1	Quantity^c

Restrictions	None
Notes	sphn:hasCode allowed coding system: SNOMED CT or other
Used in (In the range of)	has result^op

Billed Diagnosis ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BilledDiagnosis`
Description	discharge diagnosis used for the billing system (e.g. for building the Diagnosis Related Groups) according to guidelines of the national authority (e.g. Swiss Federal Office of Public Health), e.g. K35.3 acute appendicitis with localized peritonitis
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 89100005 \| Final diagnosis (discharge) (contextual qualifier) (qualifier value) \|^c LOINC 38999-9 \| Hospital discharge DRG [Interpretation] \|^c
Parents	Diagnosis^c
	has code^op	1 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has subject age^op	0 .. 1	Age^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has rank code^op	0 .. 1		Yes
	has record datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has code^op : descendants of the given classes are allowed icd-10-gm:ICD-10-GM^c has rank code^op : descendants of the given classes are not allowed SNOMED 1354479004 \| Complementary (qualifier value) \|^c SNOMED 2603003 \| Secondary (qualifier value) \|^c SNOMED 63161005 \| Principal (qualifier value) \|^c

Billed Procedure ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BilledProcedure`
Description	procedure, coded for billing (e.g. for building the Diagnosis Related Groups) according to guidelines of the national authority (e.g. Swiss Federal Office of Public Health), e.g. 57.34 open biopsy of the urinary bladder
Schema representation
Parents	Medical Procedure^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has body site^op	0 .. 1	Body Site^c
	has rank code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has code^op	1 .. 1		Yes
	has administrative case^op	0 .. 1	Administrative Case^c
	has intent^op	0 .. 1	Intent^c
	has source system^op	1 .. *	Source System^c

Restrictions	has rank code^op : descendants of the given classes are not allowed SNOMED 1354474009 \| Supplementary (qualifier value) \|^c SNOMED 63161005 \| Principal (qualifier value) \|^c has code^op : descendants of the given classes are allowed CHOP CHOP \| CHOP \|^c

Biobanksample ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Biobanksample`
Description	biosample stored in a biobank
Schema representation
Parents	SPHN Concept^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has biobank name^dp	1 .. 1	xsd:string^c
	has sample^op	1 .. 1	Sample^c
	has identifier^dp	1 .. 1	xsd:string^c

Restrictions	None

Birth ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Birth`
Description	the event of being born
Schema representation
Parents	SPHN Concept^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has gestational age^op	0 .. 1	Gestational Age At Birth^c
	has country^op	0 .. 1	Country^c
	has source system^op	1 .. *	Source System^c
	has medical device^op	0 .. *	Medical Device^c
	has date^op	0 .. 1	Birth Date^c
	has group size^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has delivery mode code^op	0 .. 1		Yes

Restrictions	has group size^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM cblnbcbr \| {#} \|^c has delivery mode code^op : descendants of the given classes are allowed SNOMED 118215003 \| Delivery finding (finding) \|^c
Notes	For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer, sphn:Implant are not allowed
Used in (In the range of)	has associated event^op

Birth Date ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BirthDate`
Description	the date and time of birth of the individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 184099003 \| Date of birth (observable entity) \|^c LOINC 21112-8 \| Birth date \|^c
Parents	SPHN Concept^c
	has comparator^op	0 .. 1	Comparator^c
	has month^dp	0 .. 1	xsd:gMonth^c
	has year^dp	1 .. 1	xsd:gYear^c
	has day^dp	0 .. 1	xsd:gDay^c
	has time^dp	0 .. 1	xsd:time^c

Restrictions	None
Used in (In the range of)	has date^op

Blood Pressure ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BloodPressure`
Description	blood pressure of the individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 75367002 \| Blood pressure (observable entity) \|^c
Parents	Result^c
	has mean pressure^op	0 .. 1		Yes
	has data file^op	0 .. 1	Time Series Data File^c
	has systolic pressure^op	0 .. 1		Yes
	has diastolic pressure^op	0 .. 1		Yes
	has datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has mean pressure^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM mmsblHgsbr \| mm[Hg] \|^c has systolic pressure^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM mmsblHgsbr \| mm[Hg] \|^c has diastolic pressure^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM mmsblHgsbr \| mm[Hg] \|^c
Used in (In the range of)	has result^op

Blood Pressure Measurement ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BloodPressureMeasurement`
Description	measurement process of a blood pressure on an individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 46973005 \| Blood pressure taking (procedure) \|^c
Parents	Measurement^c
	has medical device^op	0 .. 1	Medical Device^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has body site^op	0 .. 1		Yes
	has result^op	1 .. *	Blood Pressure^c
	has method code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c

Restrictions	has body site^op / has code^op : descendants of the given classes are allowed SNOMED 14975008 \| Forearm structure (body structure) \|^c SNOMED 68367000 \| Thigh structure (body structure) \|^c SNOMED 113257007 \| Structure of cardiovascular system (body structure) \|^c SNOMED 344001 \| Ankle region structure (body structure) \|^c SNOMED 53840002 \| Structure of calf of leg (body structure) \|^c SNOMED 7569003 \| Finger structure (body structure) \|^c SNOMED 8205005 \| Wrist region structure (body structure) \|^c SNOMED 40983000 \| Structure of upper extremity between shoulder and elbow (body structure) \|^c has method code^op : descendants of the given classes are allowed SNOMED 46973005 \| Blood pressure taking (procedure) \|^c SNOMED 716777001 \| Hemodynamic monitoring (regime/therapy) \|^c
Notes	For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer are not allowed

Body Height ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BodyHeight`
Description	height of the individual
Schema representation
Meaning binding (Equivalent-classes)	LOINC 8302-2 \| Body height \|^c SNOMED 50373000 \| Body height measure (observable entity) \|^c
Parents	Result^c
	has quantity^op	1 .. 1	Quantity^c
	has data determination^op	0 .. 1	Data Determination^c
	has datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	None
Used in (In the range of)	has result^op

Body Height Measurement ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BodyHeightMeasurement`
Description	measurement of the height of the individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 14456009 \| Measuring height of patient (procedure) \|^c
Parents	Measurement^c
	has result^op	1 .. 1	Body Height^c
	has method code^op	0 .. 1		Yes
	has associated event^op	0 .. 1	Birth^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has medical device^op	0 .. 1	Medical Device^c

Restrictions	has method code^op : descendants of the given classes are allowed SNOMED 128927009 \| Procedure by method (procedure) \|^c
Notes	For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer, sphn:Implant are not allowed

Body Mass Index ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BodyMassIndex`
Description	body weight in kilograms divided by the square of the body height in meters
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 60621009 \| Body mass index (observable entity) \|^c LOINC 39156-5 \| Body mass index (BMI) [Ratio] \|^c
Parents	SPHN Concept^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has determination datetime^dp	0 .. 1	xsd:dateTime^c
	has quantity^op	1 .. 1		Yes

Restrictions	has quantity^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM kgperm2 \| kg/m2 \|^c

Body Position ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BodyPosition`
Description	position of the body during a certain time interval, examination or therapy
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 397155001 \| Body position (observable entity) \|^c
Parents	SPHN Concept^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has code^op	1 .. 1		Yes
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 9851009 \| Body position finding (finding) \|^c

Body Site ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BodySite`
Description	any anatomical structure, any nonspecific and anatomical site, as well as morphologic abnormalities
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 123037004 \| Body structure (body structure) \|^c LOINC 39111-0 \| Body site \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1		Yes
	has laterality^op	0 .. 1	Laterality^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 123037004 \| Body structure (body structure) \|^c
Used in (In the range of)	has resting point^op has body site^op has insertion point^op

Body Surface Area ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BodySurfaceArea`
Description	two-dimensional measure of the outer layer of the body
Schema representation
Meaning binding (Equivalent-classes)	LOINC 8277-6 \| Body surface area \|^c SNOMED 301898006 \| Body surface area (observable entity) \|^c
Parents	SPHN Concept^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has quantity^op	1 .. 1		Yes
	has administrative case^op	0 .. 1	Administrative Case^c
	has determination datetime^dp	0 .. 1	xsd:dateTime^c
	has source system^op	1 .. *	Source System^c
	has calculation method^op	0 .. 1	Body Surface Area calculation method^c

Restrictions	has quantity^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM m2 \| m2 \|^c

Body Temperature ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BodyTemperature`
Description	body temperature of the individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 386725007 \| Body temperature (observable entity) \|^c LOINC 8310-5 \| Body temperature \|^c
Parents	Result^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has quantity^op	0 .. 1	Quantity^c
	has data file^op	0 .. 1	Time Series Data File^c

Restrictions	None
Used in (In the range of)	has result^op

Body Temperature Measurement ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BodyTemperatureMeasurement`
Description	measurement of the body temperature of the individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 56342008 \| Temperature taking (procedure) \|^c
Parents	Measurement^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has medical device^op	0 .. 1	Medical Device^c
	has body site^op	0 .. 1	Body Site^c
	has result^op	1 .. *	Body Temperature^c
	has method code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has method code^op : descendants of the given classes are allowed SNOMED 128927009 \| Procedure by method (procedure) \|^c
Notes	For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer are not allowed

Body Weight ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BodyWeight`
Description	weight of the individual
Schema representation
Meaning binding (Equivalent-classes)	LOINC 29463-7 \| Body weight \|^c SNOMED 27113001 \| Body weight (observable entity) \|^c
Parents	Result^c
	has quantity^op	1 .. 1	Quantity^c
	has data determination^op	0 .. 1	Data Determination^c
	has datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	None
Used in (In the range of)	has result^op

Body Weight Measurement ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#BodyWeightMeasurement`
Description	measurement of the weight of the individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 39857003 \| Weighing patient (procedure) \|^c
Parents	Measurement^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has method code^op	0 .. 1		Yes
	has associated event^op	0 .. 1	Birth^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has medical device^op	0 .. 1	Medical Device^c
	has result^op	1 .. 1	Body Weight^c

Restrictions	has method code^op : descendants of the given classes are allowed SNOMED 128927009 \| Procedure by method (procedure) \|^c
Notes	For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer, sphn:Implant are not allowed

Cardiac Index ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#CardiacIndex`
Description	cardiac output in relation to the body surface area (BSA)
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 54993008 \| Cardiac index (observable entity) \|^c
Parents	SPHN Concept^c
	has quantity^op	1 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has determination datetime^dp	0 .. 1	xsd:dateTime^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has method code^op	0 .. 1		Yes

Restrictions	has quantity^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM Lperminperm2 \| L/min/m2 \|^c has method code^op : descendants of the given classes are allowed SNOMED 63075001 \| Monitoring of cardiac output/cardiac index (regime/therapy) \|^c

Cardiac Output ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#CardiacOutput`
Description	volume of blood passing through the heart per unit of time
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 82799009 \| Cardiac output (observable entity) \|^c
Parents	Result^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has data file^op	0 .. 1	Time Series Data File^c
	has quantity^op	0 .. 1	Quantity^c

Restrictions	None
Used in (In the range of)	has result^op

Cardiac Output Measurement ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#CardiacOutputMeasurement`
Description	measurement of the cardiac output of the individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 117610000 \| Measurement of cardiac output (procedure) \|^c
Parents	Measurement^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c
	has medical device^op	0 .. 1	Medical Device^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has result^op	1 .. *	Cardiac Output^c
	has method code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c

Restrictions	has method code^op : descendants of the given classes are allowed SNOMED 128927009 \| Procedure by method (procedure) \|^c
Notes	For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer are not allowed

Care Handling ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#CareHandling`
Description	describes the relationship between the individual and care provider institute
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 225365006 \| Care regime (regime/therapy) \|^c
Parents	SPHN Concept^c
	has source system^op	1 .. *	Source System^c
	has type code^op	1 .. 1		Yes

Restrictions	has type code^op : descendants of the given classes are not allowed SNOMED 371883000 \| Outpatient procedure (procedure) \|^c SNOMED 304903009 \| Provision of day care (regime/therapy) \|^c SNOMED 394656005 \| Inpatient care (regime/therapy) \|^c
Used in (In the range of)	has care handling^op

Chromosomal Location ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ChromosomalLocation`
Description	chromosome locus defined as cytoband intervals
Schema representation
Meaning binding (Equivalent-classes)	GENO 0000614 \| chromosomal region \|^c SO 0000830 \| chromosome_part \|^c
Parents	SPHN Concept^c
	has start cytoband code^op	1 .. 1	Code^c
	has end cytoband code^op	1 .. 1	Code^c
	has chromosome^op	1 .. 1	Chromosome^c

Restrictions

None

Notes

sphn:hasEndCytobandCode allowed coding system: ISCN

sphn:hasStartCytobandCode allowed coding system: ISCN

Used in
(In the range of)

has breakpoint^op
has deletion breakpoint^op
has insertion breakpoint^op
has feature location^op

Chromosome ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Chromosome`
Description	thread-like structure composed of tightly coiled DNA and histones or circular DNA (mitochondrial DNA). These structures act as carriers of genetic information
Schema representation
Meaning binding (Equivalent-classes)	LOINC 48000-4 \| Chromosome [Identifier] in Blood or Tissue by Molecular genetics method \|^c SNOMED 91272006 \| Chromosome (cell structure) \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 91272006 \| Chromosome (cell structure) \|^c
Used in (In the range of)	has chromosome^op

Circumference ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Circumference`
Description	circumference of a body site
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 248365001 \| Circumference measure (observable entity) \|^c
Parents	Result^c
	has quantity^op	1 .. 1	Quantity^c
	has datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	None
Used in (In the range of)	has result^op

Circumference Measurement ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#CircumferenceMeasurement`
Description	measurement of the circumference measure of a body site
Schema representation
Parents	Measurement^c
	has medical device^op	0 .. 1	Medical Device^c
	has result^op	1 .. 1	Circumference^c
	has method code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has associated event^op	0 .. 1	Birth^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has body site^op	0 .. 1	Body Site^c

Restrictions	has method code^op : descendants of the given classes are allowed SNOMED 128927009 \| Procedure by method (procedure) \|^c
Notes	For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer, sphn:Implant are not allowed

Civil Status ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#CivilStatus`
Description	the civil status indicates the familial and social situation of the individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 365581002 \| Finding of marital or partnership status (finding) \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1		Yes
	has event datetime^dp	0 .. 1	xsd:dateTime^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c

Restrictions	has code^op : descendants of the given classes are not allowed SNOMED 14012001 \| Common law partnership (finding) \|^c SNOMED 266945001 \| Broken with partner (finding) \|^c SNOMED 20295000 \| Divorced (finding) \|^c SNOMED 33553000 \| Widowed (finding) \|^c SNOMED 125681006 \| Single person (finding) \|^c SNOMED 87915002 \| Married (finding) \|^c

Code ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Code`
Description	symbols and/or expressions defined in a coding system
Schema representation
Parents	SPHN Concept^c
	has coding system and version^dp	1 .. 1	xsd:string^c
	has name^dp	0 .. 1	xsd:string^c
	has identifier^dp	1 .. 1	xsd:string^c

Restrictions	None
Used in (In the range of)	has acquisition code^op has administration route code^op has institution code^op has kit code^op has rank code^op has cell morphology code^op has condition code^op has graft type code^op has type code^op has derived sequence^op has agent code^op has target enrichment kit code^op has product code^op has verification status code^op has relative temporality code^op has status code^op has presence code^op has code^op has delivery mode code^op has method code^op has cell count estimate code^op has material type code^op has end cytoband code^op has reaction type code^op has severity code^op has certainty code^op has zygosity code^op has output code^op has degree code^op has start cytoband code^op has staining method code^op has allele origin code^op has route code^op has format code^op has circumstance code^op has regulatory feature code^op has manifestation code^op has mode code^op has staining result code^op has reason to stop code^op has regularity code^op

Consent ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Consent`
Description	information on the individual’s permission to make health related data and collected samples available for research purposes
Schema representation
Meaning binding (Equivalent-classes)	LOINC 59284-0 \| Consent Document \|^c SNOMED 371537001 \| Consent report (record artifact) \|^c
Parents	SPHN Concept^c
	has type code^op	1 .. 1		Yes
	has status code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has template identifier^dp	0 .. 1	xsd:string^c
	has source system^op	1 .. *	Source System^c
	has datetime^dp	1 .. 1	xsd:dateTime^c

Restrictions	has type code^op : descendants of the given classes are not allowed SNOMED 410529002 \| Not needed (qualifier value) \|^c SNOMED 69658003 \| Specific (qualifier value) \|^c SNOMED 60132005 \| Generalized (qualifier value) \|^c has status code^op : descendants of the given classes are not allowed SNOMED 385645004 \| Accepted (qualifier value) \|^c SNOMED 225795001 \| Is informed (finding) \|^c SNOMED 443390004 \| Declined (qualifier value) \|^c

Copy Number Variation ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#CopyNumberVariation`
Description	structural genomic variant characterized by relative changes in the number of copies of a specific genomic segment compared to a reference sequence
Schema representation
Meaning binding (Equivalent-classes)	SO 0001019 \| copy_number_variation \|^c
Parents	Genomic Variation^c
	has feature location^op	0 .. 1	Genomic Position^c or Chromosomal Location^c
	has total copy number^op	0 .. 1		Yes
	has type code^op	1 .. 1		Yes

Restrictions	has total copy number^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM cblnbcbr \| {#} \|^c has type code^op : descendants of the given classes are not allowed SO 0001743 \| copy_number_loss \|^c SO 0001742 \| copy_number_gain \|^c

Country ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Country`
Description	distinct part of the world, such as a state, nation, or other political entity, often but not necessarily a sovereign state
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 223369002 \| Country (geographic location) \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 223369002 \| Country (geographic location) \|^c SNOMED 223860005 \| United Kingdom of Great Britain and Northern Ireland (geographic location) \|^c
Used in (In the range of)	has country^op has associated country^op

Data Determination ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#DataDetermination`
Description	describes how the data was determined, e.g. measured, calculated
Schema representation
Parents	SPHN Concept^c
	has method code^op	1 .. 1	Yes

Restrictions	has method code^op : descendants of the given classes are not allowed SNOMED 414135002 \| Estimated (qualifier value) \|^c SNOMED 258104002 \| Measured (qualifier value) \|^c SNOMED 263760002 \| Forced (qualifier value) \|^c SNOMED 258090004 \| Calculated (qualifier value) \|^c SNOMED 87982008 \| Manual (qualifier value) \|^c
Used in (In the range of)	has data determination^op

Data File ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#DataFile`
Description	electronic resource of information, which can be stored, accessed and transferred as a single unit
Schema representation
Parents	SPHN Concept^c
Children (Sub-classes)	Time Series Data File^c

	Cardinality	Class or Datatype	Restriction
has creation datetime^dp	0 .. 1	xsd:dateTime^c
has encoding^op	0 .. 1	Data File encoding^c
has source system^op	1 .. *	Source System^c
has format code^op	0 .. 1		Yes
has hash^op	0 .. 1	Hash^c
has name^dp	0 .. 1	xsd:string^c
has uniform resource identifier^dp	0 .. 1	xsd:string^c
has subject pseudo identifier^op	0 .. *	Subject Pseudo Identifier^c

Restrictions	has format code^op : descendants of the given classes are allowed EDAM format_1915 \| Format \|^c
Used in (In the range of)	has output^op has data file^op has input^op

Data Processing ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#DataProcessing`
Description	a process that produces output data from input data
Schema representation
Parents	SPHN Concept^c
Children (Sub-classes)	Sequencing Analysis^c

	Cardinality	Class or Datatype	Restriction
has standard operating procedure^op	0 .. 1	Standard Operating Procedure^c
has software^op	0 .. 1	Software^c
has code^op	1 .. 1		Yes
has subject pseudo identifier^op	0 .. *	Subject Pseudo Identifier^c
has output^op	0 .. *	Data File^c
has source system^op	1 .. *	Source System^c
has input^op	0 .. *	Data File^c
has administrative case^op	0 .. *	Administrative Case^c
has start datetime^dp	0 .. 1	xsd:dateTime^c
has quality control metric^op	0 .. *	Quality Control Metric^c
has predecessor^op	0 .. *	Data Processing^c or Assay^c

Restrictions	has code^op : descendants of the given classes are allowed OBI 0200000 \| data transformation \|^c EDAM operation_0004 \| Operation \|^c Code^c Terminology^c
Notes	sphn:hasCode allowed coding system: EDAM, OBI or other
Used in (In the range of)	has predecessor^op

Data Provider ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#DataProvider`
Description	organization that prepares and delivers data
Schema representation
Parents	SPHN Concept^c
	has department^op	0 .. 1	Department^c
	has category^op	0 .. 1	Data Provider category^c
	has institution code^op	1 .. 1	Code^c

Restrictions	None
Notes	sphn:hasInstitutionCode allowed coding system: UID
Used in (In the range of)	has data provider^op

Data Release ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#DataRelease`
Description	Metadata about the release of the data
Schema representation
Parents	SPHN Concept^c
	has data provider^op	1 .. 1	Data Provider^c
	has extraction datetime^dp	1 .. 1	xsd:dateTime^c
	dcterms:conformsTo	1 .. 1

Restrictions	None

Death ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Death`
Description	cessation of all vital bodily functions
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 419620001 \| Death (event) \|^c
Parents	SPHN Concept^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has report datetime^dp	0 .. 1	xsd:dateTime^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c
	has circumstance code^op	0 .. 1		Yes
	has condition code^op	0 .. 1		Yes
	has date^op	0 .. 1	Death Date^c

Restrictions

has circumstance code^op : descendants of the given classes are allowed

icd-10-gm:ICD-10-GM^c SNOMED 419620001 | Death (event) |^c

has condition code^op : descendants of the given classes are allowed

icd-10-gm:ICD-10-GM^c SNOMED 64572001 | Disease (disorder) |^c

Notes

sphn:hasCircumstanceCode allowed coding system: SNOMED CT, ICD-10-GM

sphn:hasConditionCode allowed coding system: SNOMED CT, ICD-10-GM

Used in
(In the range of)

has death^op

Death Date ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#DeathDate`
Description	the date and time of death of the individual
Schema representation
Meaning binding (Equivalent-classes)	LOINC 81954-0 \| Date of death [Date] \|^c SNOMED 399753006 \| Date of death (observable entity) \|^c
Parents	SPHN Concept^c
	has year^dp	1 .. 1	xsd:gYear^c
	has day^dp	0 .. 1	xsd:gDay^c
	has time^dp	0 .. 1	xsd:time^c
	has month^dp	0 .. 1	xsd:gMonth^c

Restrictions	None
Used in (In the range of)	has date^op

Department ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Department`
Description	dedicated division of an organization
Schema representation
Parents	SPHN Concept^c
	has name^dp	1 .. 1	xsd:string^c

Restrictions	None
Used in (In the range of)	has department^op

Diagnosis ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Diagnosis`
Description	determination of the presence of a disease, condition, or injury from expressed signs and symptoms and assessments such as physical examination, laboratory test, or the like
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 439401001 \| Diagnosis (observable entity) \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Oncology Diagnosis^c Billed Diagnosis^c Nursing Diagnosis^c

	Cardinality	Class or Datatype	Restriction
has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
has code^op	1 .. *		Yes
has subject age^op	0 .. 1	Age^c
has administrative case^op	0 .. 1	Administrative Case^c
has source system^op	1 .. *	Source System^c
has record datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has code^op : descendants of the given classes are allowed ICD-O-3 ICDO3Morphology \| Morphologz encodes the histology of the neoplasm \|^c Code^c ICD-O-3 ICDO3Topography \| Topography specifies site of tumour. \|^c Terminology^c
Notes	sphn:hasCode allowed coding system: SNOMED CT, ICD-10-GM, ICD-O-3, NANDA, ORDO or other
Used in (In the range of)	has indication to start^op

Discharge ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Discharge`
Description	discharge of an individual from the healthcare provider institute
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 58000006 \| Patient discharge (procedure) \|^c
Parents	SPHN Concept^c
	has target location^op	0 .. 1	Location^c
	has datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	None
Used in (In the range of)	has discharge^op

Drug ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Drug`
Description	any substance with the intent to prevent, diagnose, treat, or relieve symptoms of a disease or abnormal condition
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 410942007 \| Drug or medicament (substance) \|^c
Parents	SPHN Concept^c
	has active ingredient^op	0 .. *	Substance^c
	has quantity^op	0 .. 1	Quantity^c
	has inactive ingredient^op	0 .. *	Substance^c
	has source system^op	1 .. *	Source System^c
	has article^op	0 .. 1	Drug Article^c

Restrictions	None
Used in (In the range of)	has chemical agent^op has drug^op

Drug Administration Event ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#DrugAdministrationEvent`
Description	single event at which a drug was administered to the patient; this could be a single time point in case of a pill/cream or a duration in case of a single infusion pack or a single patch; one or many drug administration events are initiated by a drug prescription depending on the frequency stated in the prescription
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 182832007 \| Procedure related to management of drug administration (procedure) \|^c
Parents	SPHN Concept^c
	has administration route code^op	0 .. 1		Yes
	has drug^op	1 .. 1	Drug^c
	has time pattern^op	0 .. 1	Time Pattern^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has reason to stop code^op	0 .. 1		Yes
	has administrative case^op	0 .. 1	Administrative Case^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has duration^op	0 .. 1	Quantity^c

Restrictions	has administration route code^op : descendants of the given classes are allowed SNOMED 284009009 \| Route of administration value (qualifier value) \|^c has reason to stop code^op : descendants of the given classes are not allowed SNOMED 441308009 \| New diagnosis (observable entity) \|^c SNOMED 31438003 \| Drug resistance (disorder) \|^c SNOMED 395007004 \| Medication stopped - ineffective (situation) \|^c SNOMED 182846007 \| Doctor stopped drugs - medical aim achieved (situation) \|^c SNOMED 182845006 \| Doctor stopped drugs - avoid interaction (situation) \|^c SNOMED 182844005 \| Doctor stopped drugs - patient dislikes (situation) \|^c SNOMED 182872003 \| Drug discontinued - too expensive (situation) \|^c SNOMED 419620001 \| Death (event) \|^c SNOMED 395009001 \| Medication stopped - side effect (situation) \|^c SNOMED 399307001 \| Lost to follow-up (finding) \|^c SNOMED 74964007 \| Other (qualifier value) \|^c

Drug Article ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#DrugArticle`
Description	general details identifying a medication on the level of its commercial article
Schema representation
Parents	SPHN Concept^c
	has manufactured dose form^op	0 .. 1	Pharmaceutical Dose Form^c
	has source system^op	1 .. *	Source System^c
	has name^dp	0 .. 1	xsd:string^c
	has code^op	0 .. 1	Code^c

Restrictions	None
Notes	sphn:hasCode allowed coding system: GTIN
Used in (In the range of)	has article^op

Drug Prescription ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#DrugPrescription`
Description	plan that defines at which frequency a drug should be administered to a patient with a given quantity; at every frequency time point a drug administration event should occur
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 33633005 \| Prescription of drug (procedure) \|^c
Parents	SPHN Concept^c
	has first administration datetime^dp	1 .. 1	xsd:dateTime^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has intent^op	0 .. *	Intent^c
	has source system^op	1 .. *	Source System^c
	has last administration datetime^dp	0 .. 1	xsd:dateTime^c
	has record datetime^dp	0 .. 1	xsd:dateTime^c
	has administration route code^op	0 .. 1		Yes
	has drug^op	1 .. 1	Drug^c
	has indication to start^op	0 .. *	Diagnosis^c
	has frequency^op	0 .. 1	Quantity^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has time pattern^op	0 .. 1	Time Pattern^c

Restrictions	has administration route code^op : descendants of the given classes are allowed SNOMED 284009009 \| Route of administration value (qualifier value) \|^c

Electrocardiogram ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Electrocardiogram`
Description	output of an electrocardiographic procedure
Schema representation
Parents	SPHN Concept^c
	has data file^op	1 .. *	Data File^c

Restrictions	None
Notes	For sphn:hasDataFile, instances of sphn:TimeSeriesDataFile are not allowed
Used in (In the range of)	has output^op

Electrocardiographic Procedure ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ElectrocardiographicProcedure`
Description	electrographic procedure on the heart which results in a graph of voltage versus time visualizing the electrical activity of the heart muscle using electrodes placed on the skin
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 29303009 \| Electrocardiographic procedure (procedure) \|^c
Parents	Medical Procedure^c
	has subject physiologic state^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has number of leads^op	0 .. 1		Yes
	has output^op	0 .. 1	Electrocardiogram^c
	has code^op	1 .. *		Yes
	has administrative case^op	0 .. 1	Administrative Case^c
	has intent^op	0 .. 1		Yes
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has body site^op	0 .. *	Body Site^c

Restrictions	has subject physiologic state^op / has code^op : descendants of the given classes are not allowed SNOMED 128976003 \| Exercise state (finding) \|^c SNOMED 128975004 \| Resting state (finding) \|^c has number of leads^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM cblnbcbr \| {#} \|^c has code^op : descendants of the given classes are allowed SNOMED 29303009 \| Electrocardiographic procedure (procedure) \|^c has intent^op / has code^op : descendants of the given classes are not allowed SNOMED 360156006 \| Screening - procedure intent (qualifier value) \|^c SNOMED 261004008 \| Diagnostic intent (qualifier value) \|^c

Excluded Disorder ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ExcludedDisorder`
Description	determination of the absence of a disease
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 315215002 \| Disorder excluded (situation) \|^c
Parents	SPHN Concept^c
	has record datetime^dp	1 .. 1	xsd:dateTime^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has code^op	1 .. *		Yes
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c

Restrictions	has code^op : descendants of the given classes are allowed ICD-O-3 ICDO3Morphology \| Morphologz encodes the histology of the neoplasm \|^c Code^c ICD-O-3 ICDO3Topography \| Topography specifies site of tumour. \|^c Terminology^c
Notes	sphn:hasCode allowed coding system: SNOMED CT, ICD-10-GM, ICD-O-3, NANDA, ORDO or other

Exposure ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Exposure`
Description	contact between a physical, biological, or chemical agent and an individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 418715001 \| Exposure to potentially harmful entity (event) \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Tobacco Exposure^c

	Cardinality	Class or Datatype	Restriction
has duration^op	0 .. 1	Quantity^c
has start datetime^dp	0 .. 1	xsd:dateTime^c
has record datetime^dp	0 .. 1	xsd:dateTime^c
has agent code^op	0 .. 1		Yes
has quantity^op	0 .. 1	Quantity^c
has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
has degree code^op	0 .. 1		Yes
has source system^op	1 .. *	Source System^c
has route code^op	0 .. *		Yes
has administrative case^op	0 .. 1	Administrative Case^c
has end datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has agent code^op : descendants of the given classes are allowed SNOMED 138875005 \| SNOMED CT Concept (SNOMED RT+CTV3) \|^c has degree code^op : descendants of the given classes are allowed SNOMED 138875005 \| SNOMED CT Concept (SNOMED RT+CTV3) \|^c has route code^op : descendants of the given classes are allowed SNOMED 138875005 \| SNOMED CT Concept (SNOMED RT+CTV3) \|^c
Used in (In the range of)	has exposure^op

Fluid Balance ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#FluidBalance`
Description	difference between fluid input and output during a specified time interval
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 364396009 \| Fluid balance observable (observable entity) \|^c
Parents	SPHN Concept^c
	has fluid input output^op	0 .. *	Fluid Input Output^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has quantity^op	1 .. 1	Quantity^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	1 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c

Restrictions	None

Fluid Input Output ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#FluidInputOutput`
Description	gain or loss of fluid that impacts the fluid balance
Schema representation
Parents	SPHN Concept^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	1 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has substance^op	1 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c

Restrictions	has substance^op / has code^op : descendants of the given classes are allowed SNOMED 33463005 \| Liquid substance (substance) \|^c
Used in (In the range of)	has fluid input output^op

Follow Up ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#FollowUp`
Description	procedure for following up on the patient status
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 390906007 \| Follow-up encounter (procedure) \|^c
Parents	SPHN Concept^c
	has source system^op	1 .. *	Source System^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has result^op	1 .. 1	Vital Status^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has code^op	0 .. 1		Yes

Restrictions	has code^op : descendants of the given classes are not allowed SNOMED 386473003 \| Telephone follow-up (procedure) \|^c SNOMED 281036007 \| Follow-up consultation (procedure) \|^c

Fraction Of Inspired Oxygen ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#FractionOfInspiredOxygen`
Description	value of the fraction of inspired oxygen (FiO2) in a defined setting
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 250774007 \| Inspired oxygen concentration (observable entity) \|^c
Parents	Result^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has quantity^op	1 .. 1		Yes

Restrictions	has quantity^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM percent \| % \|^c
Used in (In the range of)	has fraction of inspired oxygen^op

Gene ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Gene`
Description	fundamental unit of heredity that contains necessary elements to encode for a transcript
Schema representation
Meaning binding (Equivalent-classes)	SO 0000704 \| gene \|^c SNOMED 67271001 \| Gene (substance) \|^c
Parents	SPHN Concept^c
	has organism^op	0 .. 1	Organism^c
	has code^op	1 .. 1	Terminology^c or Code^c
	has transcript^op	0 .. *	Transcript^c
	has protein^op	0 .. *	Protein^c

Restrictions	None
Notes	sphn:hasCode allowed coding system: HGNC, NCBI Gene, Ensembl or other
Used in (In the range of)	has focus gene^op has gene^op has target molecule^op

Gene Fusion ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GeneFusion`
Description	the joining of two or more genes resulting in a chimeric transcript and/or a novel interaction
Schema representation
Meaning binding (Equivalent-classes)	SO 0001565 \| gene_fusion \|^c
Parents	Genomic Variation^c
	has feature location^op	0 .. 1	Genomic Position^c or Chromosomal Location^c
	has gene^op	1 .. *	Gene^c
	has regulatory feature code^op	0 .. *		Yes

Restrictions	has regulatory feature code^op : descendants of the given classes are allowed SO 0005836 \| regulatory_region \|^c

Gene Panel ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GenePanel`
Description	collection of genes that have been grouped for testing
Schema representation
Parents	SPHN Concept^c
	has focus gene^op	1 .. *	Gene^c
	has data file^op	0 .. *	Data File^c

Restrictions	None
Notes	For sphn:hasDataFile, instances of sphn:TimeSeriesDataFile are not allowed
Used in (In the range of)	has gene panel^op

Genomic Deletion ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GenomicDeletion`
Description	genetic variant involving the deletion of a specific location in a DNA sequence
Schema representation
Meaning binding (Equivalent-classes)	SO 0000159 \| deletion \|^c
Parents	Genomic Variation^c
	has feature location^op	1 .. 1	Genomic Position^c or Chromosomal Location^c
	has deleted sequence^op	0 .. 1	Nucleotide Sequence^c

Restrictions	None

Genomic Delins ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GenomicDelins`
Description	genomic variation in which one or more nucleotides are replaced by different nucleotides relative to a reference sequence, and it is neither a substitution nor an inversion
Schema representation
Meaning binding (Equivalent-classes)	SO 1000032 \| delins \|^c
Parents	Genomic Variation^c
	has genomic position^op	1 .. 1	Genomic Position^c
	has inserted sequence^op	1 .. 1	Nucleotide Sequence^c
	has deleted sequence^op	1 .. 1	Nucleotide Sequence^c

Restrictions	None

Genomic Duplication ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GenomicDuplication`
Description	sequence alteration where, in comparison to a reference sequence, an additional copy of one or more nucleotides or amino acids is inserted immediately downstream of the original sequence at the 3' end
Schema representation
Meaning binding (Equivalent-classes)	SO 1000035 \| duplication \|^c
Parents	Genomic Variation^c
	has feature location^op	1 .. 1	Genomic Position^c or Chromosomal Location^c
	has nucleotide sequence^op	0 .. 1	Nucleotide Sequence^c

Restrictions	None

Genomic Insertion ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GenomicInsertion`
Description	genetic variant involving the addition of a DNA sequence in a specific location
Schema representation
Meaning binding (Equivalent-classes)	SO 0000667 \| insertion \|^c
Parents	Genomic Variation^c
	has feature location^op	1 .. 1	Genomic Position^c or Chromosomal Location^c
	has inserted sequence^op	0 .. 1	Nucleotide Sequence^c

Restrictions	None

Genomic Inversion ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GenomicInversion`
Description	a sequence change where, compared to a reference sequence, more than one nucleotide replacing the original sequence is the reverse complement of the original sequence
Schema representation
Meaning binding (Equivalent-classes)	SO 1000036 \| inversion \|^c
Parents	Genomic Variation^c
	has nucleotide sequence^op	0 .. 1	Nucleotide Sequence^c
	has feature location^op	1 .. 1	Genomic Position^c or Chromosomal Location^c

Restrictions	None

Genomic Position ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GenomicPosition`
Description	genomic position with respect to a reference
Schema representation
Meaning binding (Equivalent-classes)	GENO 0000902 \| genomic feature location \|^c
Parents	SPHN Concept^c
	has coordinate convention^op	1 .. 1	Genomic Position coordinate convention^c
	has reference sequence^op	1 .. 1	Reference Sequence^c
	has start^dp	1 .. 1	xsd:double^c
	has end^dp	1 .. 1	xsd:double^c

Restrictions	None
Used in (In the range of)	has feature location^op has breakpoint^op has genomic position^op has deletion breakpoint^op has insertion breakpoint^op

Genomic Translocation ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GenomicTranslocation`
Description	a sequence change where, compared to a reference sequence, from a specific nucleotide position (the break point), all nucleotides upstream derive from another chromosome than those downstream
Schema representation
Meaning binding (Equivalent-classes)	SO 0000199 \| translocation \|^c
Parents	Genomic Variation^c
	has breakpoint^op	0 .. *	Genomic Position^c or Chromosomal Location^c

Restrictions	None

Genomic Transposition ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GenomicTransposition`
Description	a genomic alteration in which a large segment of DNA is relocated from one site in the genome to a different site, when compared to a reference sequence.
Schema representation
Meaning binding (Equivalent-classes)	SO 0000453 \| chromosomal_transposition \|^c
Parents	Genomic Variation^c
	has insertion breakpoint^op	1 .. 1	Genomic Position^c or Chromosomal Location^c
	has deletion breakpoint^op	1 .. 1	Genomic Position^c or Chromosomal Location^c

Restrictions	None

Genomic Variation ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GenomicVariation`
Description	a genomic variation occurring at a defined position
Schema representation
Meaning binding (Equivalent-classes)	GENO 0000476 \| variant \|^c SO 0001060 \| sequence_variant \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Copy Number Variation^c Genomic Transposition^c Genomic Translocation^c Gene Fusion^c Genomic Insertion^c Single Nucleotide Variation^c Genomic Deletion^c Genomic Delins^c Genomic Duplication^c Genomic Inversion^c

Used in (In the range of)	has genomic variation^op

Gestational Age At Birth ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#GestationalAgeAtBirth`
Description	gestational age of a child at birth
Schema representation
Meaning binding (Equivalent-classes)	LOINC 76516-4 \| Gestational age--at birth \|^c SNOMED 412726003 \| Length of gestation at birth (observable entity) \|^c
Parents	SPHN Concept^c
	has quantity^op	1 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c

Restrictions	has quantity^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM d \| d \|^c
Used in (In the range of)	has gestational age^op

Hash ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Hash`
Description	irreversible unique number computed on an information entity used to check its validity and integrity
Schema representation
Parents	SPHN Concept^c
	has string value^dp	1 .. 1	xsd:string^c
	has algorithm^op	1 .. 1	Hash algorithm^c

Restrictions	None
Used in (In the range of)	has hash^op

Healthcare Encounter ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#HealthcareEncounter`
Description	an interaction between an individual and a specific unit or service of a healthcare provider institute, e.g. emergency, intensive care unit, for the purpose of providing healthcare service(s) or assessing the health status of an individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 308335008 \| Patient encounter procedure (procedure) \|^c
Parents	SPHN Concept^c
	has origin location^op	0 .. 1	Location^c
	has identifier^dp	0 .. 1	xsd:string^c
	has target location^op	0 .. 1	Location^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has therapeutic area^op	0 .. 1	Therapeutic Area^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has current location^op	0 .. 1	Location^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c

Restrictions	None

Healthcare Primary Information System ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#HealthcarePrimaryInformationSystem`
Description	primary source system of the healthcare data
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 706593004 \| Information system (physical object) \|^c
Parents	SPHN Concept^c
	has name^dp	0 .. 1	xsd:string^c
	has code^op	0 .. 1		Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 706593004 \| Information system (physical object) \|^c
Used in (In the range of)	has primary system^op

Heart Rate ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#HeartRate`
Description	frequency of the heart beats, i.e. the number of time a heart beats per unit of time
Schema representation
Meaning binding (Equivalent-classes)	LOINC 8867-4 \| Heart rate \|^c SNOMED 364075005 \| Heart rate (observable entity) \|^c
Parents	Result^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has regularity code^op	0 .. 1		Yes
	has data file^op	0 .. 1	Time Series Data File^c
	has quantity^op	0 .. 1	Quantity^c

Restrictions	has regularity code^op : descendants of the given classes are not allowed SNOMED 61086009 \| Pulse irregular (finding) \|^c SNOMED 271636001 \| Pulse regular (finding) \|^c
Used in (In the range of)	has result^op

Heart Rate Measurement ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#HeartRateMeasurement`
Description	measurement of the heart rate of the individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 65653002 \| Pulse taking (procedure) \|^c
Parents	Measurement^c
	has subject physiologic state^op	0 .. 1	Physiologic State^c
	has result^op	1 .. *	Heart Rate^c
	has method code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c
	has medical device^op	0 .. 1	Medical Device^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has body site^op	0 .. 1	Body Site^c

Restrictions	has method code^op : descendants of the given classes are allowed SNOMED 128927009 \| Procedure by method (procedure) \|^c
Notes	For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer are not allowed

Home Address ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#HomeAddress`
Description	permanent place of residence of an individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 397635003 \| Address (observable entity) \|^c
Parents	SPHN Concept^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has country^op	0 .. 1	Country^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	0 .. 1	xsd:dateTime^c
	has swiss socio economic position^op	0 .. *	Swiss Socio Economic Position^c

Restrictions	None

Imaging Procedure ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ImagingProcedure`
Description	imaging procedure used for examination of a body site or function
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 363679005 \| Imaging (procedure) \|^c
Parents	Medical Procedure^c
	has body site^op	0 .. *	Body Site^c
	has code^op	1 .. *		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has intent^op	0 .. 1	Intent^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 363679005 \| Imaging (procedure) \|^c

Implant ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Implant`
Description	implanted medical device, includes, e.g., heart valve prostheses or joint prostheses
Schema representation
Parents	Medical Device^c
	has software^op	0 .. *	Software^c
	has type code^op	1 .. 1		Yes
	has product code^op	0 .. 1	Code^c or Terminology^c

Restrictions	has type code^op : descendants of the given classes are allowed SNOMED 40388003 \| Implant, device (physical object) \|^c SNOMED 14106009 \| Cardiac pacemaker, device (physical object) \|^c
Used in (In the range of)	has medical device^op

Implant Presence ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ImplantPresence`
Description	presence of an implanted medical device
Schema representation
Parents	SPHN Concept^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	0 .. 1	xsd:dateTime^c
	has body site^op	0 .. 1	Body Site^c
	has record datetime^dp	0 .. 1	xsd:dateTime^c
	has medical device^op	1 .. 1	Implant^c

Restrictions	None

Insurance Status ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#InsuranceStatus`
Description	status of the patient's medical insurance
Schema representation
Meaning binding (Equivalent-classes)	LOINC 87520-3 \| Coverage type \|^c
Parents	SPHN Concept^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	0 .. 1	xsd:dateTime^c
	has coverage type^op	1 .. 1	Insurance Status coverage type^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has administrative case^op	0 .. 1	Administrative Case^c

Restrictions	None

Intent ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Intent`
Description	treatment or procedure purpose
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 363675004 \| Intents (nature of procedure values) (qualifier value) \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 363675004 \| Intents (nature of procedure values) (qualifier value) \|^c
Used in (In the range of)	has intent^op

Interpretation ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Interpretation`
Description	process of making sense of an outcome to derive meaningful conclusions
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 243814003 \| Interpretation of findings (observable entity) \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Reference Interpretation^c

	Cardinality	Class or Datatype
has output^op	1 .. *	SPHN Concept^c
has input^op	0 .. *	SPHN Concept^c
has standard guideline^dp	0 .. *	xsd:string^c
has source system^op	1 .. *	Source System^c
has datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	None

Isolate ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Isolate`
Description	a specific individual microbe and its clone separated on a single occasion from a sample taken from a host or culture system
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 119303007 \| Microbial isolate specimen (specimen) \|^c
Parents	Sample^c
	has shared identifier^dp	0 .. *	xsd:anyURI^c
	has body site^op	0 .. 1	Body Site^c
	has medical device^op	0 .. 1	Medical Device^c
	has organism^op	0 .. 1	Organism^c
	has primary container^op	0 .. 1	Sample primary container^c
	has collection datetime^dp	1 .. 1	xsd:dateTime^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has identifier^dp	0 .. *	xsd:string^c
	has material type code^op	0 .. *		Yes
	has fixation type^op	0 .. 1	Sample fixation type^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c

Restrictions	has material type code^op : descendants of the given classes are allowed SNOMED 123038009 \| Specimen (specimen) \|^c
Used in (In the range of)	has sample^op

Lab Analyzer ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#LabAnalyzer`
Description	laboratory analyzer used to assess medical laboratory samples
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 30234008 \| Medical laboratory analyzer, device (physical object) \|^c
Parents	Medical Device^c
	has software^op	0 .. *	Software^c
	has type code^op	0 .. 1		Yes
	has product code^op	0 .. 1	Code^c or Terminology^c

Restrictions

has type code^op : descendants of the given classes are allowed

emdn:EMDN^c Code^c

Notes

sphn:hasTypeCode allowed coding system: GMDN, EMDN

sphn:hasProductCode allowed coding system: UDI-DI from GUDID or other

Used in
(In the range of)

has instrument^op
has test kit^op

Lab Result ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#LabResult`
Description	outcome, value, or information which gives insight about a laboratory test
Schema representation
Parents	Result^c
Children (Sub-classes)	Microbiology Microscopy Result^c Antimicrobial Susceptibility Result^c Microbiology Biomolecule Presence Result^c Microorganism Identification Result^c

	Cardinality	Class or Datatype
has numerical reference^op	0 .. 1	Reference Value^c or Reference Range^c
has code^op	0 .. 1	Terminology^c or Code^c
has string value^dp	0 .. 1	xsd:string^c
has quantity^op	0 .. 1	Quantity^c

Restrictions	None
Notes	sphn:hasCode allowed coding system: SNOMED CT or other
Used in (In the range of)	has result^op

Lab Test ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#LabTest`
Description	specific laboratory test performed to analyze a sample with a given equipment and leading to specific results
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 15220000 \| Laboratory test (procedure) \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Microorganism Identification Lab Test^c Antimicrobial Susceptibility Lab Test^c Microbiology Microscopy Lab Test^c Microbiology Biomolecule Presence Lab Test^c

	Cardinality	Class or Datatype	Restriction
has result^op	1 .. *	Lab Result^c
has code^op	1 .. 1		Yes
has test kit^op	0 .. 1	Lab Analyzer^c
has instrument^op	0 .. 1	Lab Analyzer^c

Restrictions

has code^op : descendants of the given classes are allowed

sphn-loinc:LOINC^c SNOMED 138875005 | SNOMED CT Concept (SNOMED RT+CTV3) |^c

Notes

For sphn:hasResult, instances of sphn:AntimicrobialSusceptibilityResult, sphn:MicrobiologyBiomoleculePresenceResult, sphn:MicrobiologyMicroscopyResult, sphn:MicroorganismIdentificationResult are not allowed

sphn:hasCode allowed coding system: LOINC, SNOMED CT

Used in
(In the range of)

has lab test^op

Lab Test Event ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#LabTestEvent`
Description	occurrence in which one or multiple laboratory tests are performed on a biological specimen at a given time
Schema representation
Parents	SPHN Concept^c
Children (Sub-classes)	Microbiology Microscopy Lab Test Event^c Microbiology Biomolecule Presence Lab Test Event^c Microorganism Identification Lab Test Event^c Antimicrobial Susceptibility Lab Test Event^c

	Cardinality	Class or Datatype
has administrative case^op	0 .. 1	Administrative Case^c
has datetime^dp	0 .. 1	xsd:dateTime^c
has sample^op	0 .. 1	Sample^c
has report datetime^dp	0 .. 1	xsd:dateTime^c
has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
has lab test^op	1 .. *	Lab Test^c
has source system^op	1 .. *	Source System^c

Restrictions	None
Notes	For sphn:hasLabTest, instances of sphn:AntimicrobialSusceptibilityLabTest, sphn:MicrobiologyBiomoleculePresenceLabTest, sphn:MicrobiologyMicroscopyLabTest, sphn:MicroorganismIdentificationLabTest are not allowed

Laterality ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Laterality`
Description	localization with respect to the side of the body
Schema representation
Meaning binding (Equivalent-classes)	LOINC 20228-3 \| Anatomic part Laterality \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are not allowed SNOMED 51440002 \| Right and left (qualifier value) \|^c SNOMED 24028007 \| Right (qualifier value) \|^c SNOMED 66459002 \| Unilateral (qualifier value) \|^c SNOMED 7771000 \| Left (qualifier value) \|^c
Used in (In the range of)	has laterality^op

Library Preparation ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#LibraryPreparation`
Description	process which results in the creation of a library from fragments of DNA
Schema representation
Meaning binding (Equivalent-classes)	OBI 0000711 \| library preparation \|^c
Parents	Sample Processing^c
	has kit code^op	0 .. 1	Code^c or Terminology^c
	has source system^op	1 .. *	Source System^c
	has predecessor^op	0 .. *	Sample Processing^c
	has start datetime^dp	0 .. 1	xsd:dateTime^c
	has quality control metric^op	0 .. *	Quality Control Metric^c
	has standard operating procedure^op	0 .. 1	Standard Operating Procedure^c
	has target enrichment kit code^op	0 .. 1	Terminology^c or Code^c
	has subject pseudo identifier^op	0 .. *	Subject Pseudo Identifier^c
	has gene panel^op	0 .. 1	Gene Panel^c
	has output^op	0 .. 1	Sample^c
	has intended insert size^op	0 .. 1		Yes
	has code^op	0 .. 1		Yes
	has input^op	0 .. *	Sample^c
	has administrative case^op	0 .. *	Administrative Case^c

Restrictions

has intended insert size^op / has unit^op / has code^op : descendants of the given classes are not allowed

UCUM cblbase_paircbr | {base_pair} |^c

has code^op : descendants of the given classes are allowed

OBI 0000711 | library preparation |^c Code^c Terminology^c

Notes

For sphn:hasOutput, instances of sphn:TumorSpecimen are not allowed

sphn:hasCode allowed coding system: OBI, EFO or other

sphn:hasTargetEnrichmentKitCode allowed coding system: EFO, GENEPIO, FAIRGenomes or other

sphn:hasKitCode allowed coding system: EFO, GENEPIO, FAIRGenomes or other

Used in
(In the range of)

has library preparation^op

Location ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Location`
Description	physical location or medical division taking care of the individual
Schema representation
Parents	SPHN Concept^c
	has type code^op	1 .. 1		Yes
	has exact^dp	0 .. 1	xsd:string^c

Restrictions	has type code^op : descendants of the given classes are allowed SNOMED 276339004 \| Environment (environment) \|^c
Used in (In the range of)	has current location^op has target location^op has origin location^op has location^op

Measurement ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Measurement`
Description	process of quantitatively defining the value or magnitude of an attribute or characteristic in comparison to a defined standard
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 122869004 \| Measurement procedure (procedure) \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Body Weight Measurement^c Cardiac Output Measurement^c Circumference Measurement^c Heart Rate Measurement^c Body Temperature Measurement^c Body Height Measurement^c Oxygen Saturation Measurement^c Respiratory Rate Measurement^c Blood Pressure Measurement^c

	Cardinality	Class or Datatype	Restriction
has method code^op	0 .. 1		Yes
has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
has administrative case^op	0 .. 1	Administrative Case^c
has performer^op	0 .. 1	Performer^c
has source system^op	1 .. *	Source System^c
has medical device^op	0 .. 1	Medical Device^c
has end datetime^dp	0 .. 1	xsd:dateTime^c
has start datetime^dp	1 .. 1	xsd:dateTime^c
has result^op	1 .. *	Result^c

Restrictions

has method code^op : descendants of the given classes are allowed

SNOMED 128927009 | Procedure by method (procedure) |^c

Notes

For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer are not allowed

For sphn:hasResult, instances of sphn:LabResult, sphn:VitalStatus, sphn:AntimicrobialSusceptibilityResult, sphn:MicrobiologyBiomoleculePresenceResult, sphn:MicrobiologyMicroscopyResult, sphn:MicroorganismIdentificationResult, sphn:ReferenceInterpretationResult are not allowed

Medical Device ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MedicalDevice`
Description	product intended for medical use when the main effect is not achieved by a medicinal product; medical devices include, but are not limited to, implants, instruments, devices, in vitro diagnostics
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 63653004 \| Biomedical device (physical object) \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Implant^c Access Device^c Lab Analyzer^c

	Cardinality	Class or Datatype	Restriction
has software^op	0 .. *	Software^c
has type code^op	0 .. 1		Yes
has product code^op	0 .. 1	Code^c or Terminology^c

Restrictions	has type code^op : descendants of the given classes are allowed Code^c Terminology^c SNOMED 272181003 \| Clinical equipment and/or device (physical object) \|^c
Notes	sphn:hasTypeCode allowed coding system: SNOMED CT or other
Used in (In the range of)	has medical device^op

Medical Procedure ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MedicalProcedure`
Description	invasive or non-invasive intervention performed for, with or on behalf of an individual whose purpose is to assess, improve, maintain, promote or modify health, functioning or health conditions
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 71388002 \| Procedure (procedure) \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Imaging Procedure^c Billed Procedure^c Electrocardiographic Procedure^c Oncology Surgery^c Organ Support^c Radiotherapy Procedure^c

	Cardinality	Class or Datatype
has end datetime^dp	0 .. 1	xsd:dateTime^c
has start datetime^dp	1 .. 1	xsd:dateTime^c
has body site^op	0 .. *	Body Site^c
has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
has code^op	1 .. *	Terminology^c or Code^c
has administrative case^op	0 .. 1	Administrative Case^c
has intent^op	0 .. 1	Intent^c
has source system^op	1 .. *	Source System^c

Restrictions	None
Notes	sphn:hasCode allowed coding system: SNOMED CT, CHOP or other

Microbiology Biomolecule Presence Lab Test ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MicrobiologyBiomoleculePresenceLabTest`
Description	specific lab test performed on an isolate for detecting the presence of a target biomolecule
Schema representation
Parents	Lab Test^c
	has result^op	1 .. *	Microbiology Biomolecule Presence Result^c
	has instrument^op	0 .. 1	Lab Analyzer^c
	has code^op	1 .. 1		Yes
	has target molecule^op	1 .. 1	Protein^c or Gene^c
	has test kit^op	0 .. 1	Lab Analyzer^c

Restrictions	has code^op : descendants of the given classes are allowed sphn-loinc:LOINC^c SNOMED 138875005 \| SNOMED CT Concept (SNOMED RT+CTV3) \|^c
Used in (In the range of)	has lab test^op

Microbiology Biomolecule Presence Lab Test Event ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MicrobiologyBiomoleculePresenceLabTestEvent`
Description	occurrence in which one or multiple laboratory tests are performed on an isolate at a given time to detect the presence of a biomolecule
Schema representation
Parents	Lab Test Event^c
	has report datetime^dp	0 .. 1	xsd:dateTime^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has lab test^op	1 .. *	Microbiology Biomolecule Presence Lab Test^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has sample^op	1 .. 1	Isolate^c

Restrictions	None

Microbiology Biomolecule Presence Result ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MicrobiologyBiomoleculePresenceResult`
Description	result of microbiology biomolecule presence test for a specific isolate analyzed
Schema representation
Parents	Lab Result^c
	has code^op	0 .. 1		Yes
	has string value^dp	0 .. 1	xsd:string^c
	has quantity^op	0 .. 1	Quantity^c
	has numerical reference^op	0 .. 1	Reference Value^c or Reference Range^c

Restrictions	has code^op : descendants of the given classes are not allowed SNOMED 373068000 \| Undetermined (qualifier value) \|^c SNOMED 10828004 \| Positive (qualifier value) \|^c SNOMED 260385009 \| Negative (qualifier value) \|^c
Used in (In the range of)	has result^op

Microbiology Microscopy Lab Test ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MicrobiologyMicroscopyLabTest`
Description	specific microbiology microscopy lab test performed on a sample
Schema representation
Parents	Lab Test^c
	has code^op	1 .. 1		Yes
	has test kit^op	0 .. 1	Lab Analyzer^c
	has staining method code^op	0 .. 1		Yes
	has result^op	1 .. *	Microbiology Microscopy Result^c
	has instrument^op	0 .. 1	Lab Analyzer^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 117259009 \| Microscopy (procedure) \|^c has staining method code^op : descendants of the given classes are allowed SNOMED 37926009 \| Microbial stain method (procedure) \|^c
Used in (In the range of)	has lab test^op

Microbiology Microscopy Lab Test Event ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MicrobiologyMicroscopyLabTestEvent`
Description	occurrence in which one or multiple microbiology microscopy laboratory tests are performed on a sample at a given time
Schema representation
Parents	Lab Test Event^c
	has sample^op	1 .. 1	Sample^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has report datetime^dp	0 .. 1	xsd:dateTime^c
	has lab test^op	1 .. *	Microbiology Microscopy Lab Test^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c
	has datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	None
Notes	For sphn:hasSample, instances of sphn:TumorSpecimen are not allowed

Microbiology Microscopy Result ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MicrobiologyMicroscopyResult`
Description	microscopy analysis results for a specific studied biosample in microbiology
Schema representation
Parents	Lab Result^c
	has cell count estimate code^op	0 .. 1		Yes
	has cell morphology code^op	0 .. 1		Yes
	has staining result code^op	0 .. 1		Yes
	has numerical reference^op	0 .. 1	Reference Value^c or Reference Range^c
	has string value^dp	0 .. 1	xsd:string^c
	has quantity^op	0 .. 1	Quantity^c
	has cell organization^op	0 .. 1	Microbiology Microscopy Result cell organization^c

Restrictions	has cell count estimate code^op : descendants of the given classes are not allowed SNOMED 260413007 \| None (qualifier value) \|^c SNOMED 46998006 \| Massive (qualifier value) \|^c SNOMED 260396001 \| Numerous (qualifier value) \|^c SNOMED 57176003 \| Few (qualifier value) \|^c has cell morphology code^op : descendants of the given classes are not allowed SNOMED 42700002 \| Round shape (qualifier value) \|^c SNOMED 1354477002 \| Filamentous shape (qualifier value) \|^c SNOMED 84360004 \| Ovoid shape (qualifier value) \|^c SNOMED 1354475005 \| Rod shape (qualifier value) \|^c SNOMED 1354478007 \| Curved-rod shape (qualifier value) \|^c SNOMED 63879006 \| Spiral shape (qualifier value) \|^c SNOMED 74964007 \| Other (qualifier value) \|^c SNOMED 1354476006 \| Elongated shape (qualifier value) \|^c has staining result code^op : descendants of the given classes are not allowed SNOMED 373068000 \| Undetermined (qualifier value) \|^c SNOMED 10828004 \| Positive (qualifier value) \|^c SNOMED 260385009 \| Negative (qualifier value) \|^c
Used in (In the range of)	has result^op

Microorganism Identification Lab Test ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MicroorganismIdentificationLabTest`
Description	specific lab test performed on a sample for identifying microorganism(s)
Schema representation
Parents	Lab Test^c
	has result^op	1 .. *	Microorganism Identification Result^c
	has instrument^op	0 .. 1	Lab Analyzer^c
	has code^op	1 .. 1		Yes
	has test kit^op	0 .. 1	Lab Analyzer^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 19851009 \| Microbiology procedure (procedure) \|^c
Used in (In the range of)	has lab test^op

Microorganism Identification Lab Test Event ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MicroorganismIdentificationLabTestEvent`
Description	occurrence in which one or multiple laboratory tests are performed on a sample at a given time for identifying microorganism(s)
Schema representation
Parents	Lab Test Event^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has sample^op	1 .. 1	Sample^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has report datetime^dp	0 .. 1	xsd:dateTime^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has lab test^op	1 .. *	Microorganism Identification Lab Test^c
	has source system^op	1 .. *	Source System^c

Restrictions	None
Notes	For sphn:hasSample, instances of sphn:TumorSpecimen are not allowed

Microorganism Identification Result ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#MicroorganismIdentificationResult`
Description	result of the microorganism identification lab test
Schema representation
Parents	Lab Result^c
	has organism^op	0 .. 1	Organism^c
	has numerical reference^op	0 .. 1	Reference Value^c or Reference Range^c
	has string value^dp	0 .. 1	xsd:string^c
	has quantity^op	0 .. 1	Quantity^c
	has time to positivity^op	0 .. 1	Quantity^c
	has presence code^op	0 .. 1		Yes

Restrictions	has presence code^op : descendants of the given classes are not allowed SNOMED 373068000 \| Undetermined (qualifier value) \|^c SNOMED 52101004 \| Present (qualifier value) \|^c SNOMED 2667000 \| Absent (qualifier value) \|^c
Used in (In the range of)	has result^op

Nationality ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Nationality`
Description	nationality of the individual
Schema representation
Parents	SPHN Concept^c
	has source system^op	1 .. *	Source System^c
	has record datetime^dp	0 .. 1	xsd:dateTime^c
	has associated country^op	1 .. 1	Country^c
	has acquisition code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c

Restrictions	has acquisition code^op : descendants of the given classes are not allowed SNOMED 255396000 \| Acquired (qualifier value) \|^c SNOMED 19535007 \| Original (qualifier value) \|^c

Nucleotide Sequence ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#NucleotideSequence`
Description	a linear arrangement of nucleotides that make up the DNA or RNA sequence
Schema representation
Parents	SPHN Concept^c
	has literal sequence^dp	0 .. 1	xsd:string^c
	has sequence length^op	0 .. 1		Yes
	has derived sequence^op	0 .. 1	Code^c or Terminology^c

Restrictions	has sequence length^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM cblnucleotidecbr \| {nucleotide} \|^c UCUM cblbase_paircbr \| {base_pair} \|^c
Notes	sphn:hasDerivedSequence allowed coding system: HGVS or other
Used in (In the range of)	has inserted sequence^op has deleted sequence^op has nucleotide sequence^op

Nursing Diagnosis ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#NursingDiagnosis`
Description	clinical judgment concerning a human response to health conditions/life processes, or a vulnerability for that response, by an individual, family, group or community; a nursing diagnosis provides the basis for selection of nursing interventions to achieve outcomes for which the nurse has accountability
Schema representation
Parents	Diagnosis^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has record datetime^dp	0 .. 1	xsd:dateTime^c
	has code^op	1 .. 1	Code^c
	has subject age^op	0 .. 1	Age^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c

Restrictions	None
Notes	sphn:hasCode allowed coding system: NANDA

Nutrition Intake ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#NutritionIntake`
Description	intake of nutritious substance and/or the respective amount of energy consumed
Schema representation
Parents	SPHN Concept^c
	has source system^op	1 .. *	Source System^c
	has mode code^op	0 .. 1		Yes
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has substance^op	0 .. *	Substance^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has energy quantity^op	0 .. 1	Quantity^c
	has administrative case^op	0 .. 1	Administrative Case^c

Restrictions	has mode code^op : descendants of the given classes are not allowed SNOMED 169741004 \| Breastfed (finding) \|^c SNOMED 268472006 \| Infant bottle fed (finding) \|^c SNOMED 926365009 \| Parenteral nutrition infusion finding (finding) \|^c SNOMED 926364008 \| Enteral nutrition infusion finding (finding) \|^c SNOMED 289002003 \| Does feed self (finding) \|^c

Oncology Diagnosis ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#OncologyDiagnosis`
Description	determination of the presence of an oncological disease, from expressed signs and symptoms and assessments such as biopsy, tumor marker test, imaging, or the like
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 363346000 \| Malignant neoplastic disease (disorder) \|^c
Parents	Diagnosis^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has code^op	1 .. *		Yes
	has incidence datetime^dp	0 .. 1	xsd:dateTime^c
	has subject age^op	0 .. 1	Age^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c
	has body site^op	0 .. 1	Body Site^c
	has record datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has code^op : descendants of the given classes are allowed icd-10-gm:ICD-10-GM^c ICD-O-3 ICDO3Morphology \| Morphologz encodes the histology of the neoplasm \|^c ICD-O-3 ICDO3Topography \| Topography specifies site of tumour. \|^c ONCOTREE TISSUE \| Tissue \|^c
Notes	sphn:hasCode allowed coding system: ICD-10-GM, ICD-O-3, ONCOTREE

Oncology Surgery ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#OncologySurgery`
Description	invasive intervention performed for, with or on behalf of an individual whose purpose is to improve, maintain or promote health, or functioning conditions in the context of an oncological disease, by the means of partial or complete exeresis of a solid tumor lesion that is the organic substrate of this disease
Schema representation
Parents	Medical Procedure^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has code^op	1 .. *	Terminology^c or Code^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has intent^op	0 .. 1	Intent^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has body site^op	0 .. *	Body Site^c

Restrictions	None

Organ Support ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#OrganSupport`
Description	type and time period when patient was supported by organ support procedures
Schema representation
Parents	Medical Procedure^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has intent^op	0 .. 1		Yes
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has body site^op	0 .. *		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has code^op	1 .. 1		Yes

Restrictions	has intent^op / has code^op : descendants of the given classes are not allowed SNOMED 399707004 \| Supportive - procedure intent (qualifier value) \|^c has body site^op / has code^op : descendants of the given classes are allowed SNOMED 10200004 \| Liver structure (body structure) \|^c SNOMED 64033007 \| Kidney structure (body structure) \|^c SNOMED 80891009 \| Heart structure (body structure) \|^c SNOMED 39607008 \| Lung structure (body structure) \|^c has code^op : descendants of the given classes are allowed SNOMED 1149092001 \| Positive pressure airway ventilation (regime/therapy) \|^c SNOMED 232957001 \| Cardiac support procedure (procedure) \|^c SNOMED 233573008 \| Extracorporeal membrane oxygenation (procedure) \|^c SNOMED 108241001 \| Dialysis procedure (procedure) \|^c SNOMED 1222606000 \| Continuous mandatory ventilation (regime/therapy) \|^c

Organism ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Organism`
Description	living system capable of replicating or reproducing, growth and maintenance. An organism may be unicellular or multicellular
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 410607006 \| Organism (organism) \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 410607006 \| Organism (organism) \|^c Code^c
Notes	sphn:hasCode allowed coding system: SNOMED CT, NCBI Taxon
Used in (In the range of)	has organism^op

Oxygen Administration Event ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#OxygenAdministrationEvent`
Description	process during which oxygen is administered via cannula without supporting pressure
Schema representation
Parents	SPHN Concept^c
	has fraction of inspired oxygen^op	0 .. 1	Fraction Of Inspired Oxygen^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has flow rate^op	0 .. 1		Yes
	has source system^op	1 .. *	Source System^c
	has administrative case^op	1 .. 1	Administrative Case^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has medical device^op	0 .. 1		Yes

Restrictions	has flow rate^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM Lpermin \| L/min \|^c has medical device^op / has type code^op : descendants of the given classes are not allowed SNOMED 466713001 \| Basic nasal oxygen cannula (physical object) \|^c SNOMED 720742008 \| Oxygen reservoir cannula (physical object) \|^c SNOMED 426854004 \| High flow oxygen nasal cannula (physical object) \|^c
Notes	For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:Implant, sphn:LabAnalyzer are not allowed

Oxygen Saturation ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#OxygenSaturation`
Description	fraction of oxygen present in the blood
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 103228002 \| Hemoglobin saturation with oxygen (observable entity) \|^c
Parents	Result^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has data file^op	0 .. 1	Time Series Data File^c
	has quantity^op	0 .. 1		Yes

Restrictions	has quantity^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM percent \| % \|^c
Used in (In the range of)	has result^op

Oxygen Saturation Measurement ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#OxygenSaturationMeasurement`
Description	measurement of the oxygen saturation of the individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 104847001 \| Oxygen saturation measurement (procedure) \|^c
Parents	Measurement^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has body site^op	0 .. 1	Body Site^c
	has medical device^op	0 .. 1	Medical Device^c
	has result^op	1 .. *	Oxygen Saturation^c
	has method code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions

has method code^op : descendants of the given classes are allowed

SNOMED 128927009 | Procedure by method (procedure) |^c

Notes

For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer are not allowed

Performer ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Performer`
Description	person who carried out the action
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 420158005 \| Performer of method (person) \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 125676002 \| Person (person) \|^c SNOMED 14679004 \| Occupation (occupation) \|^c
Used in (In the range of)	has performer^op

Pharmaceutical Dose Form ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#PharmaceuticalDoseForm`
Description	physical manifestation of a product that contains the active ingredient(s) and/or inactive ingredient(s) that are intended to be delivered to the patient
Schema representation
Meaning binding (Equivalent-classes)	LOINC 74055-5 \| Dose form of Medication \|^c SNOMED 736542009 \| Pharmaceutical dose form (dose form) \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 736542009 \| Pharmaceutical dose form (dose form) \|^c Code^c
Notes	sphn:hasCode allowed coding system: SNOMED CT, EDQM:EDQMPDF
Used in (In the range of)	has manufactured dose form^op

Physiologic State ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#PhysiologicState`
Description	physiologic state of the individual, e.g. resting, exercise
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 128973006 \| Finding related physiologic patient state (finding) \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 128973006 \| Finding related physiologic patient state (finding) \|^c
Used in (In the range of)	has subject physiologic state^op

Problem Condition ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ProblemCondition`
Description	clinical condition, problem, diagnosis, or other event, situation, issue, or clinical concept that has risen to a level of concern
Schema representation
Meaning binding (Equivalent-classes)	LOINC 44100-6 \| Medical problem \|^c SNOMED 55607006 \| Problem (finding) \|^c
Parents	SPHN Concept^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has relative temporality code^op	0 .. 1		Yes
	has code^op	0 .. 1	Terminology^c or Code^c
	has string value^dp	0 .. 1	xsd:string^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c
	has record datetime^dp	0 .. 1	xsd:dateTime^c
	has onset datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has relative temporality code^op : descendants of the given classes are allowed SNOMED 307152002 \| Temporal periods relating to procedure (qualifier value) \|^c
Notes	sphn:hasCode allowed coding system: ICPC or other

Protein ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Protein`
Description	molecule composed by one or more chains of amino acids
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 88878007 \| Protein (substance) \|^c SO 0000104 \| polypeptide \|^c
Parents	SPHN Concept^c
	has organism^op	0 .. 1	Organism^c
	has code^op	1 .. 1	Terminology^c or Code^c

Restrictions	None
Notes	sphn:hasCode allowed coding system: UniProtKB or other
Used in (In the range of)	has target molecule^op has protein^op

Quality Control Metric ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#QualityControlMetric`
Description	report of the quality control review that was made of factors involved in a procedure
Schema representation
Meaning binding (Equivalent-classes)	EDAM data_3914 \| Quality control report \|^c
Parents	SPHN Concept^c
	has code^op	0 .. 1	Terminology^c or Code^c
	has quantity^op	0 .. 1	Quantity^c

Restrictions	None
Notes	sphn:hasCode allowed coding system: SNOMED CT, GENEPIO or other
Used in (In the range of)	has quality control metric^op

Quantity ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Quantity`
Description	an amount or a number of something
Schema representation
Parents	SPHN Concept^c
	has unit^op	1 .. 1	Unit^c
	has comparator^op	0 .. 1	Comparator^c
	has value^dp	1 .. 1		Yes

Restrictions	has value^dp : descendants of the given classes are not allowed xsd:double^c
Used in (In the range of)	has systolic pressure^op has diastolic pressure^op has sequence length^op has intended insert size^op has average insert size^op has frequency^op has fractions number^op has quantity^op has intended read length^op has flow rate^op has time to positivity^op has distance^op has mean read depth^op has entry count^op has upper limit^op has lower limit^op has total copy number^op has duration^op has read count^op has group size^op has mean pressure^op has intended read depth^op has average read length^op has number of leads^op has energy quantity^op has radiation quantity^op has tumor purity^op

Radiotherapy Procedure ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#RadiotherapyProcedure`
Description	given radiotherapy procedure, for example during oncological treatment
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 1287742003 \| Radiotherapy (procedure) \|^c
Parents	Medical Procedure^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has code^op	1 .. *		Yes
	has fractions number^op	0 .. 1		Yes
	has administrative case^op	0 .. 1	Administrative Case^c
	has intent^op	0 .. 1	Intent^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c
	has body site^op	0 .. *	Body Site^c
	has radiation quantity^op	0 .. 1		Yes

Restrictions	has code^op : descendants of the given classes are not allowed SNOMED 168524008 \| Radiotherapy - intraoperative control (procedure) \|^c SNOMED 399315003 \| Radionuclide therapy (procedure) \|^c SNOMED 33195004 \| External beam radiation therapy procedure (procedure) \|^c SNOMED 115959002 \| Stereotactic radiosurgery (procedure) \|^c SNOMED 152198000 \| Brachytherapy (procedure) \|^c SNOMED 395096001 \| Stereotactic radiotherapy (procedure) \|^c SNOMED 74964007 \| Other (qualifier value) \|^c SNOMED 78080008 \| Hyperthermia treatment of cancer (procedure) \|^c has fractions number^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM cblnbcbr \| {#} \|^c has radiation quantity^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM MBq \| MBq \|^c UCUM cGy \| cGy \|^c UCUM mCi \| mCi \|^c UCUM Gy \| Gy \|^c

Range ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Range`
Description	interval of values
Schema representation
Parents	SPHN Concept^c
Children (Sub-classes)	Reference Range^c

Property (In the domain of)			Cardinality	Class or Datatype		Restriction
	has upper limit^op		0 .. 1	Quantity^c
	has lower limit^op		0 .. 1	Quantity^c

Restrictions	None
Used in (In the range of)	has range^op

Reference Interpretation ^c# Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ReferenceInterpretation`
Description	process of making sense of a quantitative result to derive meaningful conclusions in comparison to a reference
Schema representation
Parents	Interpretation^c
	has output^op	1 .. 1	Reference Interpretation Result^c
	has input^op	0 .. 1	Result^c
	has standard guideline^dp	0 .. *	xsd:string^c
	has source system^op	1 .. *	Source System^c
	has datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	None
Notes	For sphn:hasInput, instances of sphn:TumorGradeAssessmentResult, sphn:TumorStageAssessmentResult, sphn:VitalStatus are not allowed

Reference Interpretation Result ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ReferenceInterpretationResult`
Description	outcome of the interpretation of a reference range or value
Schema representation
Parents	Result^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 260245000 \| Finding value (qualifier value) \|^c
Used in (In the range of)	has output^op

Reference Range ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ReferenceRange`
Description	interval of values that is deemed normal for a physiologic measurement in healthy individuals
Schema representation
Parents	Range^c
	has upper limit^op	0 .. 1	Quantity^c
	has lower limit^op	0 .. 1	Quantity^c

Restrictions	None
Used in (In the range of)	has numerical reference^op

Reference Sequence ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ReferenceSequence`
Description	reference construct used for comparison purposes
Schema representation
Meaning binding (Equivalent-classes)	GENO 0000017 \| reference sequence \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Terminology^c or Code^c

Restrictions	None
Notes	sphn:hasCode allowed coding system: NCBI GenBank or other
Used in (In the range of)	has reference sequence^op

Reference Value ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ReferenceValue`
Description	numeric data point serving as reference for comparison and interpretation
Schema representation
Parents	SPHN Concept^c
	has quantity^op	1 .. 1	Quantity^c

Restrictions	None
Used in (In the range of)	has numerical reference^op

Respiratory Rate ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#RespiratoryRate`
Description	frequency at which the breathing occurs
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 86290005 \| Respiratory rate (observable entity) \|^c
Parents	Result^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has data file^op	0 .. 1	Time Series Data File^c
	has data determination^op	0 .. 1		Yes
	has quantity^op	0 .. 1	Quantity^c

Restrictions	has data determination^op / has method code^op : descendants of the given classes are not allowed SNOMED 258104002 \| Measured (qualifier value) \|^c SNOMED 263760002 \| Forced (qualifier value) \|^c SNOMED 258090004 \| Calculated (qualifier value) \|^c SNOMED 87982008 \| Manual (qualifier value) \|^c
Used in (In the range of)	has result^op

Respiratory Rate Measurement ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#RespiratoryRateMeasurement`
Description	measurement of the frequency at which the breathing occurs
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 408867002 \| Taking respiratory rate (procedure) \|^c
Parents	Measurement^c
	has result^op	1 .. *	Respiratory Rate^c
	has method code^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c
	has medical device^op	0 .. 1	Medical Device^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	1 .. 1	xsd:dateTime^c

Restrictions	has method code^op : descendants of the given classes are allowed SNOMED 128927009 \| Procedure by method (procedure) \|^c
Notes	For sphn:hasMedicalDevice, instances of sphn:AccessDevice, sphn:LabAnalyzer, sphn:Implant are not allowed

Result ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Result`
Description	outcome, value, or information which gives insight about something
Schema representation
Parents	SPHN Concept^c
Children (Sub-classes)	Reference Interpretation Result^c Respiratory Rate^c Body Height^c Body Weight^c Assessment Result^c Blood Pressure^c Oxygen Saturation^c Fraction Of Inspired Oxygen^c Lab Result^c Body Temperature^c Circumference^c Cardiac Output^c Heart Rate^c Vital Status^c

Used in (In the range of)	has result^op has input^op

Resuscitation Directive ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ResuscitationDirective`
Description	decision about the extent of resuscitation interventions appropriate for a specific individual
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 304251008 \| Resuscitation status (observable entity) \|^c
Parents	SPHN Concept^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has record datetime^dp	0 .. *	xsd:dateTime^c
	has code^op	1 .. 1		Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 365870005 \| Finding of resuscitation status (finding) \|^c

SPHN Concept ^c# Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SPHNConcept`
Description	SPHN Concepts defined by the SPHN dataset
Children (Sub-classes)	Hash^c Unit^c Assessment^c Nationality^c Quality Control Metric^c Range^c Excluded Disorder^c Problem Condition^c Assessment Component^c Body Mass Index^c Death^c Code^c Admission^c Variant Descriptor^c Substance^c Transplant Presence^c Gene^c Sequencing Instrument^c Measurement^c Sample^c Sample Processing^c Lab Test^c Nutrition Intake^c Reference Value^c Assessment Event^c Assay^c Age^c Adverse Event^c Data Processing^c Birth Date^c Body Surface Area^c Source Data^c Standard Operating Procedure^c Gene Panel^c Transcript^c Home Address^c Semantic Mapping^c Source System^c Reference Sequence^c Genomic Position^c Administrative Case^c Time Pattern^c Software^c Follow Up^c Terminology^c Fluid Balance^c Biobanksample^c Diagnosis^c Exposure^c Discharge^c Electrocardiogram^c Medical Procedure^c Drug Administration Event^c Oxygen Administration Event^c Civil Status^c Access Device Presence^c Administrative Sex^c Data File^c Allergy^c Interpretation^c Pharmaceutical Dose Form^c Nucleotide Sequence^c Cardiac Index^c Resuscitation Directive^c Organism^c Lab Test Event^c Swiss Socio Economic Position^c Genomic Variation^c Care Handling^c Fluid Input Output^c Implant Presence^c Data Provider^c Country^c Data Release^c Subject Pseudo Identifier^c Gestational Age At Birth^c Performer^c Drug Prescription^c Drug^c Healthcare Primary Information System^c Value Set^c Allergen^c Healthcare Encounter^c Department^c Medical Device^c Protein^c Birth^c Chromosome^c Result^c Sequencing Run^c Quantity^c Body Position^c Insurance Status^c Data Determination^c Variant Notation^c Transplant^c Laterality^c Chromosomal Location^c Drug Article^c Intent^c Body Site^c Allergy Episode^c Location^c Death Date^c Therapeutic Area^c Physiologic State^c Consent^c

Used in (In the range of)	has coverage type^op has cell organization^op has algorithm^op has outcome^op has primary container^op has output^op has fixation type^op has input^op has calculation method^op has encoding^op has specialty name^op has coordinate convention^op has category^op has consequences^op has purpose^op has comparator^op

Sample ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Sample`
Description	any material sample for testing, diagnostic, propagation, treatment or research purposes
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 123038009 \| Specimen (specimen) \|^c
Parents	SPHN Concept^c
Children (Sub-classes)	Isolate^c Tumor Specimen^c

	Cardinality	Class or Datatype	Restriction
has primary container^op	0 .. 1	Sample primary container^c
has collection datetime^dp	1 .. 1	xsd:dateTime^c
has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
has identifier^dp	0 .. *	xsd:string^c
has material type code^op	0 .. *		Yes
has fixation type^op	0 .. 1	Sample fixation type^c
has administrative case^op	0 .. 1	Administrative Case^c
has source system^op	1 .. *	Source System^c
has medical device^op	0 .. 1	Medical Device^c
has shared identifier^dp	0 .. *	xsd:anyURI^c
has body site^op	0 .. 1	Body Site^c

Restrictions	has material type code^op : descendants of the given classes are allowed SNOMED 123038009 \| Specimen (specimen) \|^c
Used in (In the range of)	has input^op has sample^op has output^op

Sample Processing ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SampleProcessing`
Description	a process that prepares a sample for a subsequent process
Schema representation
Parents	SPHN Concept^c
Children (Sub-classes)	Library Preparation^c

	Cardinality	Class or Datatype
has subject pseudo identifier^op	0 .. *	Subject Pseudo Identifier^c
has output^op	0 .. *	Sample^c
has code^op	0 .. 1	Terminology^c or Code^c
has input^op	0 .. *	Sample^c
has administrative case^op	0 .. *	Administrative Case^c
has source system^op	1 .. *	Source System^c
has start datetime^dp	0 .. 1	xsd:dateTime^c
has quality control metric^op	0 .. *	Quality Control Metric^c
has standard operating procedure^op	0 .. 1	Standard Operating Procedure^c
has predecessor^op	0 .. *	Sample Processing^c

Restrictions	None
Notes	For sphn:hasOutput, instances of sphn:TumorSpecimen are not allowed
Used in (In the range of)	has predecessor^op

Semantic Mapping ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SemanticMapping`
Description	process of transforming data elements to a code
Schema representation
Parents	SPHN Concept^c
	has method code^op	0 .. 1		Yes
	has source system^op	1 .. *	Source System^c
	has data provider^op	1 .. 1	Data Provider^c
	has output code^op	1 .. 1	Terminology^c or Code^c
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has source data^op	0 .. *	Source Data^c
	has purpose^op	0 .. 1	Semantic Mapping purpose^c

Restrictions	has method code^op : descendants of the given classes are allowed ECO 0000217 \| assertion method \|^c

Sequencing Analysis ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SequencingAnalysis`
Description	analysis of the output of a nucleic acid sequencing assay
Schema representation
Parents	Data Processing^c
	has software^op	0 .. 1	Software^c
	has code^op	1 .. 1		Yes
	has reference sequence^op	0 .. 1	Reference Sequence^c
	has subject pseudo identifier^op	0 .. *	Subject Pseudo Identifier^c
	has output^op	1 .. *	Data File^c
	has source system^op	1 .. *	Source System^c
	has input^op	1 .. 1	Data File^c
	has administrative case^op	0 .. *	Administrative Case^c
	has start datetime^dp	0 .. 1	xsd:dateTime^c
	has quality control metric^op	0 .. *	Quality Control Metric^c
	has predecessor^op	0 .. *	Data Processing^c or Assay^c
	has standard operating procedure^op	0 .. 1	Standard Operating Procedure^c

Restrictions	has code^op : descendants of the given classes are allowed Code^c EDAM operation_2945 \| Analysis \|^c Terminology^c
Notes	sphn:hasCode allowed coding system: EDAM or other

Sequencing Assay ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SequencingAssay`
Description	an assay that exploits a sequencer as the instrument to generate results
Schema representation
Meaning binding (Equivalent-classes)	EFO EFO_0003740 \| assay by sequencer \|^c
Parents	Assay^c
	has sequencing instrument^op	0 .. 1	Sequencing Instrument^c
	has source system^op	1 .. *	Source System^c
	has start datetime^dp	0 .. 1	xsd:dateTime^c
	has sequencing run^op	0 .. *	Sequencing Run^c
	has predecessor^op	0 .. *	Sample Processing^c
	has standard operating procedure^op	0 .. 1	Standard Operating Procedure^c
	has library preparation^op	0 .. 1	Library Preparation^c
	has sample^op	0 .. *	Sample^c
	has intended read depth^op	0 .. 1		Yes
	has subject pseudo identifier^op	0 .. *	Subject Pseudo Identifier^c
	has data file^op	0 .. *	Data File^c
	has code^op	1 .. 1		Yes
	has identifier^dp	0 .. 1	xsd:string^c
	has administrative case^op	0 .. *	Administrative Case^c
	has intended read length^op	0 .. 1		Yes

Restrictions

has intended read depth^op / has unit^op / has code^op : descendants of the given classes are not allowed

UCUM cblnbcbr | {#} |^c

has code^op : descendants of the given classes are allowed

EFO EFO_0003740 | assay by sequencer |^c Code^c Terminology^c OBI 0000070 | assay |^c

has intended read length^op / has unit^op / has code^op : descendants of the given classes are not allowed

UCUM cblnucleotidecbr | {nucleotide} |^c UCUM cblbase_paircbr | {base_pair} |^c

Notes

For sphn:hasDataFile, instances of sphn:TimeSeriesDataFile are not allowed

For sphn:hasSample, instances of sphn:TumorSpecimen, sphn:Isolate are not allowed

sphn:hasCode allowed coding system: EFO, OBI or other

Sequencing Instrument ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SequencingInstrument`
Description	A sequencing instrument that is used in a sequencing assay
Schema representation
Meaning binding (Equivalent-classes)	EFO EFO_0000548 \| instrument \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are allowed OBI 0400103 \| DNA sequencer \|^c Code^c EFO EFO_0003739 \| sequencer \|^c Terminology^c
Notes	sphn:hasCode allowed coding system: OBI, EFO or other
Used in (In the range of)	has sequencing instrument^op

Sequencing Run ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SequencingRun`
Description	the valid and completed operation of a high-throughput sequencing instrument associated with a sequencing assay
Schema representation
Meaning binding (Equivalent-classes)	NCIT:C148088^c
Parents	SPHN Concept^c
	has mean read depth^op	0 .. 1		Yes
	has datetime^dp	0 .. 1	xsd:dateTime^c
	has quality control metric^op	1 .. *	Quality Control Metric^c
	has read count^op	0 .. 1		Yes
	has average read length^op	0 .. 1		Yes
	has average insert size^op	0 .. 1		Yes
	has data file^op	1 .. *	Data File^c
	has identifier^dp	0 .. 1	xsd:string^c

Restrictions	has mean read depth^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM cblnbcbr \| {#} \|^c has read count^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM cblnbcbr \| {#} \|^c has average read length^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM cblnucleotidecbr \| {nucleotide} \|^c UCUM cblbase_paircbr \| {base_pair} \|^c has average insert size^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM cblbase_paircbr \| {base_pair} \|^c
Notes	For sphn:hasDataFile, instances of sphn:TimeSeriesDataFile are not allowed
Used in (In the range of)	has sequencing run^op

Single Nucleotide Variation ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SingleNucleotideVariation`
Description	single nucleotide change in a DNA sequence at a specific location
Schema representation
Meaning binding (Equivalent-classes)	SO 0001483 \| SNV \|^c
Parents	Genomic Variation^c
	has genomic position^op	1 .. 1	Genomic Position^c
	has alternate allele^dp	1 .. 1	xsd:string^c
	has reference allele^dp	1 .. 1	xsd:string^c

Restrictions	None

Software ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Software`
Description	Set of procedures and instructions in a data processing system
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 706689003 \| Application program software (physical object) \|^c
Parents	SPHN Concept^c
	has version^dp	1 .. 1	xsd:string^c
	has uniform resource locator^dp	0 .. 1	xsd:string^c
	has description^dp	0 .. 1	xsd:string^c
	has name^dp	1 .. 1	xsd:string^c

Restrictions	None
Used in (In the range of)	has software^op

Source Data ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SourceData`
Description	raw data that has not been processed for meaningful use
Schema representation
Parents	SPHN Concept^c
	has code^op	0 .. 1	Terminology^c or Code^c
	has string value^dp	0 .. 1	xsd:string^c
	has source system^op	1 .. *	Source System^c

Restrictions	None
Used in (In the range of)	has source data^op

Source System ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SourceSystem`
Description	electronic system the data has been retrieved from
Schema representation
Parents	SPHN Concept^c
	has primary system^op	0 .. 1	Healthcare Primary Information System^c
	has category^op	0 .. 1	Source System category^c
	has name^dp	0 .. 1	xsd:string^c
	has purpose^op	0 .. 1	Source System purpose^c

Restrictions	None
Used in (In the range of)	has source system^op

Standard Operating Procedure ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#StandardOperatingProcedure`
Description	step-by-step instructions for carrying out routine operations imposed by the organization
Schema representation
Parents	SPHN Concept^c
	has description^dp	1 .. 1	xsd:string^c
	has name^dp	1 .. 1	xsd:string^c
	has data file^op	0 .. 1	Data File^c
	has version^dp	1 .. 1	xsd:string^c

Restrictions	None
Notes	For sphn:hasDataFile, instances of sphn:TimeSeriesDataFile are not allowed
Used in (In the range of)	has standard operating procedure^op

Subject Pseudo Identifier ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SubjectPseudoIdentifier`
Description	a coded unique identifier assigned by a data provider for a specific project to conceal the identity of an individual
Schema representation
Parents	SPHN Concept^c
	has identifier^dp	1 .. 1	xsd:string^c
	has data provider^op	1 .. 1	Data Provider^c
	has shared identifier^dp	0 .. *	xsd:anyURI^c

Restrictions	None
Used in (In the range of)	has subject pseudo identifier^op

Substance ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Substance`
Description	any matter of defined composition that has discrete existence, whose origin may be biological, mineral or chemical
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 105590001 \| Substance (substance) \|^c
Parents	SPHN Concept^c
	has quantity^op	0 .. 1	Quantity^c
	has code^op	0 .. 1		Yes
	has source system^op	1 .. *	Source System^c
	has generic name^dp	0 .. 1	xsd:string^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 105590001 \| Substance (substance) \|^c Code^c Terminology^c
Notes	sphn:hasCode allowed coding system: SNOMED CT, ATC, NCI Thesaurus or other
Used in (In the range of)	has chemical agent^op has substance^op has active ingredient^op has inactive ingredient^op

Swiss Socio Economic Position ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SwissSocioEconomicPosition`
Description	characterization or classification of the Swiss position in a neighborhood of an individual that takes into account income, education, occupation, and housing conditions
Schema representation
Parents	SPHN Concept^c
	has value^dp	0 .. 1		Yes
	has version^dp	0 .. 1	xsd:string^c
	has distance^op	0 .. 1		Yes

Restrictions	has value^dp : descendants of the given classes are not allowed xsd:double^c has distance^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM m \| m \|^c
Used in (In the range of)	has swiss socio economic position^op

Terminology ^c# Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Terminology`
Description	Terminology class for grouping external resources used in the SPHN project
Parents	SPHN Concept^c
Children (Sub-classes)	sphn-icd-o-3:ICD-O-3^c icd-10-gm:ICD-10-GM^c sphn-so:SO^c CHOP CHOP \| CHOP \|^c sphn-edam:EDAM^c SNOMED 138875005 \| SNOMED CT Concept (SNOMED RT+CTV3) \|^c sphn-hgnc:HGNC^c sphn-atc:ATC^c sphn-efo:EFO^c ONCOTREE TISSUE \| Tissue \|^c sphn-ordo:ORDO^c sphn-loinc:LOINC^c sphn-eco:ECO^c sphn-obi:OBI^c sphn-geno:GENO^c sphn-genepio:GENEPIO^c UCUM UCUM \| UCUM \|^c

Used in
(In the range of)

has type code^op
has material type code^op
has agent code^op
has target enrichment kit code^op
has end cytoband code^op
has reaction type code^op
has verification status code^op
has relative temporality code^op
has status code^op
has zygosity code^op
has presence code^op
has code^op
has delivery mode code^op
has method code^op
has degree code^op
has cell count estimate code^op
has start cytoband code^op
has allele origin code^op
has route code^op
has severity code^op
has certainty code^op
has output code^op
has staining method code^op
has reason to stop code^op
has format code^op
has circumstance code^op
has regulatory feature code^op
has kit code^op
has rank code^op
has cell morphology code^op
has manifestation code^op
has mode code^op
has condition code^op
has staining result code^op
has regularity code^op
has acquisition code^op
has administration route code^op
has graft type code^op
has institution code^op
has derived sequence^op
has product code^op

Therapeutic Area ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TherapeuticArea`
Description	professional health care specialization
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 394658006 \| Clinical specialty (qualifier value) \|^c
Parents	SPHN Concept^c
	has specialty name^op	1 .. 1	Therapeutic Area specialty name^c
	has source system^op	1 .. *	Source System^c

Restrictions	None
Used in (In the range of)	has therapeutic area^op

Time Pattern ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TimePattern`
Description	type of time period during which a treatment was given or an assessment was performed; this can be single time points or a continuous event
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 272103003 \| Time patterns (qualifier value) \|^c
Parents	SPHN Concept^c
	has type code^op	1 .. 1	Yes

Restrictions	has type code^op : descendants of the given classes are not allowed SNOMED 385432009 \| Not applicable (qualifier value) \|^c SNOMED 7087005 \| Intermittent (qualifier value) \|^c SNOMED 255238004 \| Continuous (qualifier value) \|^c
Used in (In the range of)	has time pattern^op

Time Series Data File ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TimeSeriesDataFile`
Description	electronic resource that contains all the results related to a measurement as time series
Schema representation
Parents	Data File^c
	has source system^op	1 .. *	Source System^c
	has hash^op	0 .. 1	Hash^c
	has encoding^op	1 .. 1	Data File encoding^c
	has format code^op	0 .. 1		Yes
	has name^dp	0 .. 1	xsd:string^c
	has entry count^op	1 .. 1		Yes
	has uniform resource identifier^dp	0 .. 1	xsd:string^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has creation datetime^dp	0 .. 1	xsd:dateTime^c

Restrictions	has format code^op : descendants of the given classes are allowed EDAM format_1915 \| Format \|^c has entry count^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM cblnbcbr \| {#} \|^c
Used in (In the range of)	has data file^op

Tobacco Exposure ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TobaccoExposure`
Description	episode of exposure of an individual to tobacco in various forms
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 229819007 \| Tobacco use and exposure (observable entity) \|^c
Parents	Exposure^c
	has degree code^op	0 .. 1		Yes
	has source system^op	1 .. *	Source System^c
	has route code^op	0 .. *		Yes
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has duration^op	0 .. 1		Yes
	has start datetime^dp	0 .. 1	xsd:dateTime^c
	has record datetime^dp	0 .. 1	xsd:dateTime^c
	has agent code^op	0 .. 1		Yes
	has type code^op	0 .. 1		Yes
	has quantity^op	0 .. 1		Yes
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has administrative case^op	0 .. 1	Administrative Case^c

Restrictions	has degree code^op : descendants of the given classes are not allowed SNOMED 62482003 \| Low (qualifier value) \|^c SNOMED 75540009 \| High (qualifier value) \|^c SNOMED 1255665007 \| Moderate (qualifier value) \|^c has route code^op : descendants of the given classes are allowed SNOMED 138875005 \| SNOMED CT Concept (SNOMED RT+CTV3) \|^c has duration^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM a \| a \|^c has agent code^op : descendants of the given classes are allowed SNOMED 39953003 \| Tobacco (substance) \|^c has type code^op : descendants of the given classes are not allowed SNOMED 702979003 \| Never used tobacco (finding) \|^c SNOMED 35361000087100 \| Ex-electronic cigarette user (finding) \|^c SNOMED 228513009 \| Ex-tobacco chewer (finding) \|^c SNOMED 722499006 \| Electronic cigarette user (finding) \|^c SNOMED 77176002 \| Smoker (finding) \|^c SNOMED 43381005 \| Passive smoker (finding) \|^c SNOMED 228493008 \| Ex-snuff user (finding) \|^c SNOMED 81703003 \| Chews tobacco (finding) \|^c SNOMED 8517006 \| Ex-smoker (finding) \|^c SNOMED 228494002 \| Snuff user (finding) \|^c has quantity^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM a \| a \|^c

Transcript ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Transcript`
Description	RNA molecules that are made from a DNA template
Schema representation
Meaning binding (Equivalent-classes)	SO 0000673 \| transcript \|^c
Parents	SPHN Concept^c
	has protein^op	0 .. 1	Protein^c
	has organism^op	0 .. 1	Organism^c
	has code^op	1 .. 1	Terminology^c or Code^c

Restrictions	None
Notes	sphn:hasCode allowed coding system: Ensembl or other
Used in (In the range of)	has transcript^op

Transplant ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Transplant`
Description	transplanted organ or tissue from self or donor, including, e.g., kidney graft or bone marrow fluid
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 24486003 \| Structure of transplant (body structure) \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes
	has graft type code^op	0 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 260667007 \| Graft (substance) \|^c SNOMED 414265000 \| Fluid containing hemopoietic stem cells (substance) \|^c has graft type code^op : descendants of the given classes are not allowed SNOMED 15879007 \| Autograft (substance) \|^c SNOMED 7970006 \| Allograft (substance) \|^c
Used in (In the range of)	has transplant^op

Transplant Presence ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TransplantPresence`
Description	presence of a transplanted organ or tissue such as, e.g., a kidney graft
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 737294004 \| Transplant present (finding) \|^c
Parents	SPHN Concept^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has source system^op	1 .. *	Source System^c
	has end datetime^dp	0 .. 1	xsd:dateTime^c
	has start datetime^dp	0 .. 1	xsd:dateTime^c
	has body site^op	0 .. 1	Body Site^c
	has record datetime^dp	0 .. 1	xsd:dateTime^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has transplant^op	1 .. 1	Transplant^c

Restrictions	None

Tumor Grade Assessment ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TumorGradeAssessment`
Description	grading system used to assess the differentiation of the tumor cells based on histology
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 277457005 \| Histological grading systems (staging scale) \|^c LOINC 21858-6 \| Grade Cancer \|^c
Parents	Assessment^c
	has result^op	0 .. 1	Tumor Grade Assessment Result^c
	has name^dp	0 .. 1	xsd:string^c
	has code^op	0 .. 1		Yes
	has range^op	0 .. 1	Range^c
	has component^op	0 .. *	Assessment Component^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 277457005 \| Histological grading systems (staging scale) \|^c
Notes	For sphn:hasRange, instances of sphn:ReferenceRange are not allowed
Used in (In the range of)	has assessment^op

Tumor Grade Assessment Event ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TumorGradeAssessmentEvent`
Description	evaluation of the tumor grade at a given time, which takes into account a predefined grading system
Schema representation
Parents	Assessment Event^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has datetime^dp	1 .. 1	xsd:dateTime^c
	has assessment^op	1 .. 1	Tumor Grade Assessment^c

Restrictions	None

Tumor Grade Assessment Result ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TumorGradeAssessmentResult`
Description	outcome of a tumor grade assessment
Schema representation
Parents	Assessment Result^c
	has code^op	0 .. 1		Yes
	has string value^dp	0 .. 1	xsd:string^c
	has quantity^op	0 .. 1	Quantity^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 138875005 \| SNOMED CT Concept (SNOMED RT+CTV3) \|^c
Used in (In the range of)	has result^op

Tumor Specimen ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TumorSpecimen`
Description	tumor specimen, volume and fixation method used
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 258435002 \| Tumor tissue specimen (specimen) \|^c
Parents	Sample^c
	has primary container^op	0 .. 1	Sample primary container^c
	has collection datetime^dp	1 .. 1	xsd:dateTime^c
	has tumor purity^op	0 .. 1		Yes
	has identifier^dp	0 .. *	xsd:string^c
	has material type code^op	0 .. *		Yes
	has fixation type^op	0 .. 1	Sample fixation type^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has medical device^op	0 .. 1	Medical Device^c
	has shared identifier^dp	0 .. *	xsd:anyURI^c
	has body site^op	0 .. 1	Body Site^c

Restrictions	has tumor purity^op / has unit^op / has code^op : descendants of the given classes are not allowed UCUM percent \| % \|^c has material type code^op : descendants of the given classes are allowed SNOMED 123038009 \| Specimen (specimen) \|^c

Tumor Stage Assessment ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TumorStageAssessment`
Description	staging system used to assess the spread of the oncology disease
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 254292007 \| Tumor staging (tumor staging) \|^c
Parents	Assessment^c
	has name^dp	0 .. 1	xsd:string^c
	has result^op	0 .. 1	Tumor Stage Assessment Result^c
	has code^op	0 .. 1		Yes
	has range^op	0 .. 1	Range^c
	has component^op	0 .. *	Assessment Component^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 254292007 \| Tumor staging (tumor staging) \|^c
Notes	For sphn:hasRange, instances of sphn:ReferenceRange are not allowed
Used in (In the range of)	has assessment^op

Tumor Stage Assessment Event ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TumorStageAssessmentEvent`
Description	evaluation of the tumor stage at a given time, which takes into account a predefined staging system
Schema representation
Parents	Assessment Event^c
	has administrative case^op	0 .. 1	Administrative Case^c
	has performer^op	0 .. 1	Performer^c
	has source system^op	1 .. *	Source System^c
	has datetime^dp	1 .. 1	xsd:dateTime^c
	has assessment^op	1 .. 1	Tumor Stage Assessment^c
	has subject pseudo identifier^op	1 .. 1	Subject Pseudo Identifier^c

Restrictions	None

Tumor Stage Assessment Result ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#TumorStageAssessmentResult`
Description	outcome of a tumor stage assessment
Schema representation
Parents	Assessment Result^c
	has code^op	0 .. 1		Yes
	has string value^dp	0 .. 1	xsd:string^c
	has quantity^op	0 .. 1	Quantity^c

Restrictions	has code^op : descendants of the given classes are allowed SNOMED 138875005 \| SNOMED CT Concept (SNOMED RT+CTV3) \|^c
Used in (In the range of)	has result^op

Unit ^c # Classes

Property (In the domain of)		Cardinality	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Unit`
Description	unit of measurement
Schema representation
Meaning binding (Equivalent-classes)	SNOMED 767524001 \| Unit of measure (qualifier value) \|^c
Parents	SPHN Concept^c
	has code^op	1 .. 1	Yes

Restrictions	has code^op : descendants of the given classes are not allowed UCUM UCUM \| UCUM \|^c
Used in (In the range of)	has unit^op

Variant Descriptor ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#VariantDescriptor`
Description	human-readable description of the variant
Schema representation
Parents	SPHN Concept^c
	has zygosity code^op	0 .. 1		Yes
	has data provider^op	0 .. 1	Data Provider^c
	has gene^op	0 .. *	Gene^c
	has code^op	0 .. 1	Terminology^c or Code^c
	has type code^op	0 .. 1		Yes
	has notation^op	0 .. *	Variant Notation^c
	has subject pseudo identifier^op	0 .. 1	Subject Pseudo Identifier^c
	has source system^op	1 .. *	Source System^c
	has allele origin code^op	0 .. 1		Yes
	has administrative case^op	0 .. 1	Administrative Case^c
	has genomic variation^op	0 .. 1	Genomic Variation^c

Restrictions	has zygosity code^op : descendants of the given classes are allowed GENO 0000133 \| zygosity \|^c has type code^op : descendants of the given classes are allowed SO 0001059 \| sequence_alteration \|^c has allele origin code^op : descendants of the given classes are allowed GENO 0000877 \| allele origin \|^c
Notes	sphn:hasCode allowed coding system: ClinVar, RefSNP or other

Variant Notation ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#VariantNotation`
Description	description of the variant using a specific nomenclature
Schema representation
Parents	SPHN Concept^c
	has coding system and version^dp	1 .. 1	xsd:string^c
	has value^dp	1 .. *		Yes

Restrictions	has value^dp : descendants of the given classes are not allowed xsd:string^c
Used in (In the range of)	has notation^op

Vital Status ^c # Classes

Property (In the domain of)		Cardinality	Class or Datatype	Restriction
URI	`https://biomedit.ch/rdf/sphn-schema/sphn#VitalStatus`
Description	state or condition of being living or deceased
Schema representation
Parents	Result^c
	has code^op	0 .. 1		Yes
	has death^op	0 .. 1	Death^c

Restrictions	has code^op : descendants of the given classes are not allowed SNOMED 399307001 \| Lost to follow-up (finding) \|^c SNOMED 438949009 \| Alive (finding) \|^c
Used in (In the range of)	has result^op

Object Properties ↑

has data provider institute
SPHN attribute object
has acquisition code
has active ingredient
has administration route code
has administrative case
has admission
has agent code
has algorithm
has allele origin code
has allergen
has article
has assessment
has associated country
has associated event
has average insert size
has average read length
has body site
has breakpoint
has calculation method
has care handling
has category
has cell count estimate code
has cell morphology code
has cell organization
has certainty code
has chemical agent
has chromosome
has circumstance code
has code
has comparator
has component
has condition code
has consequences
has coordinate convention
has country
has coverage type
has current location
has data determination
has data file
has data provider
has date
has death
has degree code
has deleted sequence
has deletion breakpoint
has delivery mode code
has department
has derived sequence
has diastolic pressure
has discharge
has distance
has drug
has duration
has encoding
has end cytoband code
has energy quantity
has entry count
has exposure
has feature location
has fixation type
has flow rate
has fluid input output
has focus gene
has format code
has fraction of inspired oxygen
has fractions number
has frequency
has gene
has gene panel
has genomic position
has genomic variation
has gestational age
has graft type code
has group size
has hash
has inactive ingredient
has indication to start
has input
has inserted sequence
has insertion breakpoint
has insertion point
has institution code
has instrument
has intended insert size
has intended read depth
has intended read length
has intent
has kit code
has lab test
has laterality
has library preparation
has location
has lower limit
has manifestation code
has manufactured dose form
has material type code
has mean pressure
has mean read depth
has medical device
has method code
has mode code
has notation
has nucleotide sequence
has number of leads
has numerical reference
has organism
has origin location
has outcome
has output
has output code
has performer
has predecessor
has presence code
has primary container
has primary system
has product code
has protein
has purpose
has quality control metric
has quantity
has radiation quantity
has range
has rank code
has reaction type code
has read count
has reason to stop code
has reference sequence
has regularity code
has regulatory feature code
has relative temporality code
has resting point
has result
has route code
has sample
has sequence length
has sequencing instrument
has sequencing run
has severity code
has software
has source data
has source system
has specialty name
has staining method code
has staining result code
has standard operating procedure
has start cytoband code
has status code
has subject age
has subject physiologic state
has subject pseudo identifier
has substance
has swiss socio economic position
has systolic pressure
has target enrichment kit code
has target location
has target molecule
has test kit
has therapeutic area
has time pattern
has time to positivity
has total copy number
has transcript
has transplant
has tumor purity
has type code
has unit
has upper limit
has verification status code
has zygosity code

has data provider institute^op # OPs

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#hasDataProviderInstitute`
Description	has data provider institute

SPHN attribute object^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SPHNAttributeObject`
Description	SPHN object attribute defined by the dataset

has acquisition code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAcquisitionCode`
Description	coded mode of acquisition of the concept
Super-properties	has code^op
Domain(s)	Nationality^c
Range	Code^c Terminology^c

has active ingredient^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasActiveIngredient`
Description	active component of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Drug^c
Range	Substance^c

has administration route code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAdministrationRouteCode`
Description	coded information specifying the route of administration
Super-properties	has route code^op
Domain(s)	Drug Administration Event^c Drug Prescription^c
Range	Code^c Terminology^c

has administrative case^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAdministrativeCase`
Description	link to an interaction between an individual and healthcare provider(s) via an administrative case identifier for the purpose of providing healthcare service(s) or assessing the health status of an individual
Super-properties	SPHN attribute object^op
Domain(s)	Lab Test Event^c Transplant Presence^c Tumor Stage Assessment Event^c Cardiac Output Measurement^c Organ Support^c Birth^c Nursing Diagnosis^c Drug Prescription^c Fluid Input Output^c Biobanksample^c Tumor Grade Assessment Event^c Body Mass Index^c Resuscitation Directive^c Oncology Diagnosis^c Body Weight Measurement^c Sample Processing^c Death^c Body Position^c Cardiac Index^c Access Device Presence^c Microbiology Microscopy Lab Test Event^c Antimicrobial Susceptibility Lab Test Event^c Radiotherapy Procedure^c Microbiology Biomolecule Presence Lab Test Event^c Diagnosis^c Measurement^c Tumor Specimen^c Billed Diagnosis^c Sample^c Problem Condition^c Oncology Surgery^c Oxygen Administration Event^c Electrocardiographic Procedure^c Respiratory Rate Measurement^c Body Surface Area^c Sequencing Analysis^c Implant Presence^c Assay^c Fluid Balance^c Circumference Measurement^c Drug Administration Event^c Adverse Event^c Heart Rate Measurement^c Oxygen Saturation Measurement^c Assessment Event^c Exposure^c Body Height Measurement^c Imaging Procedure^c Isolate^c Excluded Disorder^c Microorganism Identification Lab Test Event^c Data Processing^c Gestational Age At Birth^c Blood Pressure Measurement^c Medical Procedure^c Billed Procedure^c Healthcare Encounter^c Body Temperature Measurement^c Allergy Episode^c Library Preparation^c Insurance Status^c Nutrition Intake^c Sequencing Assay^c Variant Descriptor^c Tobacco Exposure^c
Range	Administrative Case^c

has admission^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAdmission`
Description	admission of an individual associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Administrative Case^c
Range	Admission^c

has agent code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAgentCode`
Description	coded information specifying an active power or cause (as principle, substance, physical or biological factor, etc.) that produces a specific effect
Super-properties	has code^op
Domain(s)	Exposure^c Tobacco Exposure^c
Range	Terminology^c Code^c

has algorithm^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAlgorithm`
Description	algorithm applied to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Hash^c
Range	SPHN Concept^c

has allele origin code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAlleleOriginCode`
Description	coded information specifying the origin of the allele associated to the concept
Super-properties	has code^op
Domain(s)	Variant Descriptor^c
Range	Terminology^c Code^c

has allergen^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAllergen`
Description	any substance, product or physical force producing immediate hypersensitivity responsible for the concept
Super-properties	SPHN attribute object^op
Domain(s)	Allergy Episode^c Allergy^c
Range	Allergen^c

has article^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasArticle`
Description	commercial identifier of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Drug^c
Range	Drug Article^c

has assessment^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAssessment`
Description	evaluation tool associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Assessment Event^c Tumor Grade Assessment Event^c Tumor Stage Assessment Event^c
Range	Tumor Grade Assessment^c Tumor Stage Assessment^c Assessment^c

has associated country^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAssociatedCountry`
Description	country associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Nationality^c
Range	Country^c

has associated event^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAssociatedEvent`
Description	event associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Body Weight Measurement^c Body Height Measurement^c Circumference Measurement^c
Range	Birth^c

has average insert size^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAverageInsertSize`
Description	average insert size associated to the concept
Super-properties	has quantity^op
Domain(s)	Sequencing Run^c
Range	Quantity^c

has average read length^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAverageReadLength`
Description	average read length associated to the concept
Super-properties	has quantity^op
Domain(s)	Sequencing Run^c
Range	Quantity^c

has body site^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasBodySite`
Description	anatomical site or structure associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Oxygen Saturation Measurement^c Imaging Procedure^c Isolate^c Blood Pressure Measurement^c Medical Procedure^c Billed Procedure^c Body Temperature Measurement^c Allergy Episode^c Transplant Presence^c Organ Support^c Oncology Diagnosis^c Radiotherapy Procedure^c Tumor Specimen^c Sample^c Oncology Surgery^c Electrocardiographic Procedure^c Implant Presence^c Circumference Measurement^c Heart Rate Measurement^c
Range	Body Site^c

has breakpoint^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasBreakpoint`
Description	the specific location where a chromosomal break and reattachment occur
Super-properties	SPHN attribute object^op
Domain(s)	Genomic Translocation^c
Range	Chromosomal Location^c Genomic Position^c

has calculation method^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCalculationMethod`
Description	formula or method for calculating the concept
Super-properties	SPHN attribute object^op
Domain(s)	Body Surface Area^c
Range	SPHN Concept^c

has care handling^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCareHandling`
Description	describes the relationship between the patient and care provider institute
Super-properties	SPHN attribute object^op
Domain(s)	Administrative Case^c
Range	Care Handling^c

has category^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCategory`
Description	category associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Source System^c Data Provider^c
Range	SPHN Concept^c

has cell count estimate code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCellCountEstimateCode`
Description	code of the estimated cell count associated to the concept
Super-properties	has code^op
Domain(s)	Microbiology Microscopy Result^c
Range	Terminology^c Code^c

has cell morphology code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCellMorphologyCode`
Description	coded information specifying the cell morphology associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Microbiology Microscopy Result^c
Range	Code^c Terminology^c

has cell organization^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCellOrganization`
Description	cell organization associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Microbiology Microscopy Result^c
Range	SPHN Concept^c

has certainty code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCertaintyCode`
Description	coded information specifying the degree of certainty associated to the concept
Super-properties	has code^op
Domain(s)	Allergy Episode^c
Range	Terminology^c Code^c

has chemical agent^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasChemicalAgent`
Description	chemical agent associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Antimicrobial Susceptibility Lab Test^c
Range	Drug^c Substance^c

has chromosome^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasChromosome`
Description	chromosome associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Chromosomal Location^c
Range	Chromosome^c

has circumstance code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCircumstanceCode`
Description	coded information specifying the circumstance associated to the concept
Super-properties	has code^op
Domain(s)	Death^c
Range	Terminology^c Code^c

has code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCode`
Description	coded information specifying the concept
Super-properties	SPHN attribute object^op
Domain(s)	Microbiology Biomolecule Presence Result^c Microbiology Microscopy Lab Test^c Assessment^c Oncology Diagnosis^c Sample Processing^c Billed Diagnosis^c Body Position^c Healthcare Primary Information System^c Assessment Result^c Lab Test^c Unit^c Civil Status^c Body Site^c Sequencing Analysis^c Radiotherapy Procedure^c Substance^c Diagnosis^c Antimicrobial Susceptibility Lab Test^c Adverse Event^c Pharmaceutical Dose Form^c Problem Condition^c Tumor Stage Assessment Result^c Oncology Surgery^c Tumor Grade Assessment Result^c Tumor Stage Assessment^c Electrocardiographic Procedure^c Reference Sequence^c Imaging Procedure^c Tumor Grade Assessment^c Microorganism Identification Lab Test^c Administrative Sex^c Assay^c Data Processing^c Quality Control Metric^c Performer^c Reference Interpretation Result^c Country^c Gene^c Source Data^c Assessment Component^c Microbiology Biomolecule Presence Lab Test^c Excluded Disorder^c Antimicrobial Susceptibility Result^c Variant Descriptor^c Medical Procedure^c Billed Procedure^c Physiologic State^c Vital Status^c Nursing Diagnosis^c Transplant^c Chromosome^c Drug Article^c Library Preparation^c Intent^c Sequencing Assay^c Allergen^c Follow Up^c Resuscitation Directive^c Protein^c Lab Result^c Organism^c Organ Support^c Laterality^c Transcript^c Sequencing Instrument^c
Range	Terminology^c Code^c

has comparator^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasComparator`
Description	qualifier describing imprecise values
Super-properties	SPHN attribute object^op
Domain(s)	Quantity^c Birth Date^c
Range	SPHN Concept^c

has component^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasComponent`
Description	part of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Assessment^c Tumor Grade Assessment^c Tumor Stage Assessment^c
Range	Assessment Component^c

has condition code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasConditionCode`
Description	coded information specifying the condition associated to the concept
Super-properties	has code^op
Domain(s)	Death^c
Range	Code^c Terminology^c

has consequences^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasConsequences`
Description	consequences of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Adverse Event^c
Range	SPHN Concept^c

has coordinate convention^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCoordinateConvention`
Description	convention used for the interpretation of coordinates used in the concept
Super-properties	SPHN attribute object^op
Domain(s)	Genomic Position^c
Range	SPHN Concept^c

has country^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCountry`
Description	country associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Birth^c Home Address^c
Range	Country^c

has coverage type^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCoverageType`
Description	coverage type of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Insurance Status^c
Range	SPHN Concept^c

has current location^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCurrentLocation`
Description	physical location where the individual received medical care
Super-properties	has location^op
Domain(s)	Healthcare Encounter^c
Range	Location^c

has data determination^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDataDetermination`
Description	indicates how the value was obtained
Super-properties	SPHN attribute object^op
Domain(s)	Body Height^c Body Weight^c Respiratory Rate^c
Range	Data Determination^c

has data file^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDataFile`
Description	data file associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Blood Pressure^c Respiratory Rate^c Cardiac Output^c Assay^c Oxygen Saturation^c Gene Panel^c Standard Operating Procedure^c Body Temperature^c Heart Rate^c Sequencing Assay^c Sequencing Run^c Electrocardiogram^c
Range	Time Series Data File^c Data File^c

has data provider^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDataProvider`
Description	organization that prepares and delivers the data associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Variant Descriptor^c Data Release^c Semantic Mapping^c Subject Pseudo Identifier^c
Range	Data Provider^c

has date^op ^De-id # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDate`
Description	date of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Birth^c Death^c
Range	Death Date^c Birth Date^c

has death^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDeath`
Description	death information specifying the concept
Super-properties	SPHN attribute object^op
Domain(s)	Vital Status^c
Range	Death^c

has degree code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDegreeCode`
Description	coded information specifying the degree of the concept
Super-properties	has code^op
Domain(s)	Tobacco Exposure^c Exposure^c
Range	Terminology^c Code^c

has deleted sequence^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDeletedSequence`
Description	a linear arrangement of nucleotides that make up the DNA or RNA sequence
Super-properties	has nucleotide sequence^op
Domain(s)	Genomic Delins^c Genomic Deletion^c
Range	Nucleotide Sequence^c

has deletion breakpoint^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDeletionBreakpoint`
Description	the specific location where a chromosomal break and reattachment occur
Super-properties	SPHN attribute object^op
Domain(s)	Genomic Transposition^c
Range	Chromosomal Location^c Genomic Position^c

has delivery mode code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDeliveryModeCode`
Description	coded information specifying the mode of delivery associated to the concept
Super-properties	has code^op
Domain(s)	Birth^c
Range	Terminology^c Code^c

has department^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDepartment`
Description	department of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Data Provider^c
Range	Department^c

has derived sequence^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDerivedSequence`
Description	a sequence derived from a location
Super-properties	has code^op
Domain(s)	Nucleotide Sequence^c
Range	Code^c Terminology^c

has diastolic pressure^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDiastolicPressure`
Description	diastolic pressure of the concept
Super-properties	has quantity^op
Domain(s)	Blood Pressure^c
Range	Quantity^c

has discharge^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDischarge`
Description	discharge of an individual associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Administrative Case^c
Range	Discharge^c

has distance^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDistance`
Description	distance related to the concept
Super-properties	has quantity^op
Domain(s)	Swiss Socio Economic Position^c
Range	Quantity^c

has drug^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDrug`
Description	medication associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Drug Administration Event^c Drug Prescription^c
Range	Drug^c

has duration^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDuration`
Description	elapsed time from start to end of the concept
Super-properties	has quantity^op
Domain(s)	Exposure^c Tobacco Exposure^c Allergy Episode^c Drug Administration Event^c
Range	Quantity^c

has encoding^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasEncoding`
Description	encoding of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Time Series Data File^c Data File^c
Range	SPHN Concept^c

has end cytoband code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasEndCytobandCode`
Description	coded information specifying the end cytoband of the concept
Super-properties	has code^op
Domain(s)	Chromosomal Location^c
Range	Terminology^c Code^c

has energy quantity^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasEnergyQuantity`
Description	amount of energy of the concept
Super-properties	has quantity^op
Domain(s)	Nutrition Intake^c
Range	Quantity^c

has entry count^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasEntryCount`
Description	count of entries in the concept
Super-properties	has quantity^op
Domain(s)	Time Series Data File^c
Range	Quantity^c

has exposure^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasExposure`
Description	exposure associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Allergy Episode^c
Range	Exposure^c

has feature location^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasFeatureLocation`
Description	location of the genomic feature described by the concept
Super-properties	SPHN attribute object^op
Domain(s)	Genomic Duplication^c Copy Number Variation^c Genomic Insertion^c Genomic Deletion^c Gene Fusion^c Genomic Inversion^c
Range	Genomic Position^c Chromosomal Location^c

has fixation type^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasFixationType`
Description	fixation or stabilization type
Super-properties	SPHN attribute object^op
Domain(s)	Tumor Specimen^c Sample^c Isolate^c
Range	SPHN Concept^c

has flow rate^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasFlowRate`
Description	flow rate associated to the concept
Super-properties	has quantity^op
Domain(s)	Oxygen Administration Event^c
Range	Quantity^c

has fluid input output^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasFluidInputOutput`
Description	individual fluid input and output that form the concept
Super-properties	SPHN attribute object^op
Domain(s)	Fluid Balance^c
Range	Fluid Input Output^c

has focus gene^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasFocusGene`
Description	gene of focus associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Gene Panel^c
Range	Gene^c

has format code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasFormatCode`
Description	coded information specifying the format of the concept
Super-properties	has code^op
Domain(s)	Time Series Data File^c Data File^c
Range	Terminology^c Code^c

has fraction of inspired oxygen^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasFractionOfInspiredOxygen`
Description	fraction of inspired oxygen associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Oxygen Administration Event^c
Range	Fraction Of Inspired Oxygen^c

has fractions number^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasFractionsNumber`
Description	number of fractions applied during an event
Super-properties	has quantity^op
Domain(s)	Radiotherapy Procedure^c
Range	Quantity^c

has frequency^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasFrequency`
Description	number of events per unit of time
Super-properties	has quantity^op
Domain(s)	Drug Prescription^c
Range	Quantity^c

has gene^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasGene`
Description	specific gene(s) context where the concept occurs
Super-properties	SPHN attribute object^op
Domain(s)	Variant Descriptor^c Gene Fusion^c
Range	Gene^c

has gene panel^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasGenePanel`
Description	gene panel associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Library Preparation^c
Range	Gene Panel^c

has genomic position^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasGenomicPosition`
Description	genomic position with respect to a reference
Super-properties	SPHN attribute object^op
Domain(s)	Genomic Delins^c Single Nucleotide Variation^c
Range	Genomic Position^c

has genomic variation^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasGenomicVariation`
Description	variant described by its position and sequence
Super-properties	SPHN attribute object^op
Domain(s)	Variant Descriptor^c
Range	Genomic Variation^c

has gestational age^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasGestationalAge`
Description	gestational age associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Birth^c
Range	Gestational Age At Birth^c

has graft type code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasGraftTypeCode`
Description	coded information specifying the type of graft of the concept
Super-properties	has code^op
Domain(s)	Transplant^c
Range	Code^c Terminology^c

has group size^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasGroupSize`
Description	number of individuals associated to the concept
Super-properties	has quantity^op
Domain(s)	Birth^c
Range	Quantity^c

has hash^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasHash`
Description	hash associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Time Series Data File^c Data File^c
Range	Hash^c

has inactive ingredient^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasInactiveIngredient`
Description	inert ingredients or excipients, and generally have no pharmacological effect of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Drug^c
Range	Substance^c

has indication to start^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasIndicationToStart`
Description	indication to start the concept
Super-properties	SPHN attribute object^op
Domain(s)	Drug Prescription^c
Range	Diagnosis^c

has input^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasInput`
Description	input associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Sample Processing^c Interpretation^c Reference Interpretation^c Sequencing Analysis^c Data Processing^c Library Preparation^c
Range	Sample^c SPHN Concept^c Result^c Data File^c

has inserted sequence^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasInsertedSequence`
Description	a linear arrangement of nucleotides that make up the DNA or RNA sequence
Super-properties	has nucleotide sequence^op
Domain(s)	Genomic Delins^c Genomic Insertion^c
Range	Nucleotide Sequence^c

has insertion breakpoint^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasInsertionBreakpoint`
Description	the specific location where a chromosomal break and reattachment occur
Super-properties	SPHN attribute object^op
Domain(s)	Genomic Transposition^c
Range	Chromosomal Location^c Genomic Position^c

has insertion point^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasInsertionPoint`
Description	anatomical site of insertion
Super-properties	has body site^op
Domain(s)	Access Device Presence^c
Range	Body Site^c

has institution code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasInstitutionCode`
Description	coded information specifying the institution of the concept
Super-properties	has code^op
Domain(s)	Data Provider^c
Range	Code^c Terminology^c

has instrument^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasInstrument`
Description	instrument used for the concept
Super-properties	SPHN attribute object^op
Domain(s)	Antimicrobial Susceptibility Lab Test^c Microorganism Identification Lab Test^c Microbiology Biomolecule Presence Lab Test^c Microbiology Microscopy Lab Test^c Lab Test^c
Range	Lab Analyzer^c

has intended insert size^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasIntendedInsertSize`
Description	intended insert size associated to the concept
Super-properties	has quantity^op
Domain(s)	Library Preparation^c
Range	Quantity^c

has intended read depth^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasIntendedReadDepth`
Description	intended read depth associated to the concept
Super-properties	has quantity^op
Domain(s)	Sequencing Assay^c
Range	Quantity^c

has intended read length^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasIntendedReadLength`
Description	intended read length associated to the concept
Super-properties	has quantity^op
Domain(s)	Sequencing Assay^c
Range	Quantity^c

has intent^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasIntent`
Description	intention for the concept
Super-properties	SPHN attribute object^op
Domain(s)	Organ Support^c Drug Prescription^c Radiotherapy Procedure^c Oncology Surgery^c Electrocardiographic Procedure^c Imaging Procedure^c Medical Procedure^c Billed Procedure^c
Range	Intent^c

has kit code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasKitCode`
Description	coded information specifying the kit associated to the concept
Super-properties	has code^op
Domain(s)	Library Preparation^c
Range	Code^c Terminology^c

has lab test^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasLabTest`
Description	lab test associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Microbiology Microscopy Lab Test Event^c Antimicrobial Susceptibility Lab Test Event^c Microbiology Biomolecule Presence Lab Test Event^c Microorganism Identification Lab Test Event^c Lab Test Event^c
Range	Lab Test^c Microorganism Identification Lab Test^c Microbiology Biomolecule Presence Lab Test^c Microbiology Microscopy Lab Test^c Antimicrobial Susceptibility Lab Test^c

has laterality^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasLaterality`
Description	localization with respect to the side of the body
Super-properties	SPHN attribute object^op
Domain(s)	Body Site^c
Range	Laterality^c

has library preparation^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasLibraryPreparation`
Description	library preparation associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Sequencing Assay^c
Range	Library Preparation^c

has location^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasLocation`
Description	statement about a physical location
Super-properties	SPHN attribute object^op
Range	Location^c

has lower limit^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasLowerLimit`
Description	lowest value of the concept
Super-properties	has quantity^op
Domain(s)	Range^c Reference Range^c
Range	Quantity^c

has manifestation code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasManifestationCode`
Description	coded information specifying the clinical symptom and/or sign that occurred during the specific concept
Super-properties	has code^op
Domain(s)	Allergy Episode^c
Range	Terminology^c Code^c

has manufactured dose form^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasManufacturedDoseForm`
Description	dose form presented in the manufactured item
Super-properties	SPHN attribute object^op
Domain(s)	Drug Article^c
Range	Pharmaceutical Dose Form^c

has material type code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasMaterialTypeCode`
Description	coded information specifying the material type of the concept
Super-properties	has code^op
Domain(s)	Tumor Specimen^c Sample^c Isolate^c
Range	Terminology^c Code^c

has mean pressure^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasMeanPressure`
Description	mean pressure of the concept
Super-properties	has quantity^op
Domain(s)	Blood Pressure^c
Range	Quantity^c

has mean read depth^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasMeanReadDepth`
Description	mean read depth associated to the concept
Super-properties	has quantity^op
Domain(s)	Sequencing Run^c
Range	Quantity^c

has medical device^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasMedicalDevice`
Description	medical device associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Blood Pressure Measurement^c Circumference Measurement^c Oxygen Saturation Measurement^c Body Temperature Measurement^c Isolate^c Cardiac Output Measurement^c Birth^c Access Device Presence^c Measurement^c Body Weight Measurement^c Tumor Specimen^c Sample^c Oxygen Administration Event^c Respiratory Rate Measurement^c Heart Rate Measurement^c Body Height Measurement^c Implant Presence^c
Range	Access Device^c Implant^c Medical Device^c

has method code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasMethodCode`
Description	coded information specifying the method of the concept
Super-properties	has code^op
Domain(s)	Measurement^c Body Weight Measurement^c Semantic Mapping^c Respiratory Rate Measurement^c Circumference Measurement^c Heart Rate Measurement^c Oxygen Saturation Measurement^c Body Height Measurement^c Blood Pressure Measurement^c Body Temperature Measurement^c Cardiac Output Measurement^c Data Determination^c Cardiac Index^c
Range	Terminology^c Code^c

has mode code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasModeCode`
Description	coded information specifying the mode of the concept
Super-properties	has code^op
Domain(s)	Nutrition Intake^c
Range	Terminology^c Code^c

has notation^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasNotation`
Description	description of the concept using a specific nomenclature or syntax
Super-properties	SPHN attribute object^op
Domain(s)	Variant Descriptor^c
Range	Variant Notation^c

has nucleotide sequence^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasNucleotideSequence`
Description	a linear arrangement of nucleotides that make up the DNA or RNA sequence
Super-properties	SPHN attribute object^op
Domain(s)	Genomic Inversion^c Genomic Duplication^c
Range	Nucleotide Sequence^c

has number of leads^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasNumberOfLeads`
Description	number of leads used in the concept
Super-properties	has quantity^op
Domain(s)	Electrocardiographic Procedure^c
Range	Quantity^c

has numerical reference^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasNumericalReference`
Description	numerical reference associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Microorganism Identification Result^c Antimicrobial Susceptibility Result^c Microbiology Microscopy Result^c Lab Result^c Microbiology Biomolecule Presence Result^c
Range	Reference Value^c Reference Range^c

has organism^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasOrganism`
Description	organism associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Microorganism Identification Result^c Gene^c Isolate^c Protein^c Transcript^c
Range	Organism^c

has origin location^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasOriginLocation`
Description	physical location where the individual came from
Super-properties	has location^op
Domain(s)	Healthcare Encounter^c Admission^c
Range	Location^c

has outcome^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasOutcome`
Description	result or effect of an action, situation, or event of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Adverse Event^c
Range	SPHN Concept^c

has output^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasOutput`
Description	output associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Sample Processing^c Interpretation^c Electrocardiographic Procedure^c Reference Interpretation^c Sequencing Analysis^c Data Processing^c Library Preparation^c
Range	SPHN Concept^c Reference Interpretation Result^c Data File^c Electrocardiogram^c Sample^c

has output code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasOutputCode`
Description	coded information specifying the output of the concept
Super-properties	has code^op
Domain(s)	Semantic Mapping^c
Range	Terminology^c Code^c

has performer^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasPerformer`
Description	person who performs or reports the concept
Super-properties	SPHN attribute object^op
Domain(s)	Tumor Grade Assessment Event^c Tumor Stage Assessment Event^c Cardiac Output Measurement^c Body Weight Measurement^c Measurement^c Body Height Measurement^c Respiratory Rate Measurement^c Circumference Measurement^c Heart Rate Measurement^c Oxygen Saturation Measurement^c Assessment Event^c Body Temperature Measurement^c Blood Pressure Measurement^c
Range	Performer^c

has predecessor^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasPredecessor`
Description	process preceding this concept
Super-properties	SPHN attribute object^op
Domain(s)	Library Preparation^c Sequencing Assay^c Sample Processing^c Sequencing Analysis^c Assay^c Data Processing^c
Range	Sample Processing^c Assay^c Data Processing^c

has presence code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasPresenceCode`
Description	coded information specifying the presence associated to the concept
Super-properties	has code^op
Domain(s)	Microorganism Identification Result^c
Range	Terminology^c Code^c

has primary container^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasPrimaryContainer`
Description	type of primary container of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Tumor Specimen^c Sample^c Isolate^c
Range	SPHN Concept^c

has primary system^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasPrimarySystem`
Description	primary system providing input to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Source System^c
Range	Healthcare Primary Information System^c

has product code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasProductCode`
Description	coded information specifying the concept on the level of a commercial product
Super-properties	has code^op
Domain(s)	Access Device^c Medical Device^c Lab Analyzer^c Implant^c
Range	Code^c Terminology^c

has protein^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasProtein`
Description	protein product of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Transcript^c Gene^c
Range	Protein^c

has purpose^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasPurpose`
Description	objective of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Source System^c Semantic Mapping^c
Range	SPHN Concept^c

has quality control metric^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasQualityControlMetric`
Description	quality control metric associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Library Preparation^c Sequencing Run^c Sample Processing^c Sequencing Analysis^c Data Processing^c
Range	Quality Control Metric^c

has quantity^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasQuantity`
Description	an amount or a number of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Cardiac Index^c Substance^c Microbiology Biomolecule Presence Result^c Body Height^c Body Weight^c Drug^c Microorganism Identification Result^c Circumference^c Tumor Stage Assessment Result^c Tumor Grade Assessment Result^c Respiratory Rate^c Exposure^c Fraction Of Inspired Oxygen^c Body Surface Area^c Cardiac Output^c Antimicrobial Susceptibility Result^c Quality Control Metric^c Gestational Age At Birth^c Fluid Balance^c Body Temperature^c Age^c Oxygen Saturation^c Reference Value^c Tobacco Exposure^c Heart Rate^c Microbiology Microscopy Result^c Body Mass Index^c Lab Result^c Assessment Result^c
Range	Quantity^c

has radiation quantity^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasRadiationQuantity`
Description	amount of radiation (value and unit) delivered or applied
Super-properties	has quantity^op
Domain(s)	Radiotherapy Procedure^c
Range	Quantity^c

has range^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasRange`
Description	interval of values associated to the concept
Super-properties	SPHN attribute datatype^dp
Domain(s)	Assessment^c Tumor Stage Assessment^c Tumor Grade Assessment^c Assessment Component^c
Range	Range^c

has rank code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasRankCode`
Description	coded information specifying the level of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Billed Procedure^c Billed Diagnosis^c
Range	Code^c Terminology^c

has reaction type code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasReactionTypeCode`
Description	coded information specifying the type of reaction
Super-properties	has code^op
Domain(s)	Allergy^c
Range	Terminology^c Code^c

has read count^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasReadCount`
Description	read count associated with the concept
Super-properties	has quantity^op
Domain(s)	Sequencing Run^c
Range	Quantity^c

has reason to stop code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasReasonToStopCode`
Description	coded information indicating the reason to stop the concept
Super-properties	has code^op
Domain(s)	Drug Administration Event^c
Range	Terminology^c Code^c

has reference sequence^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasReferenceSequence`
Description	reference sequence used to define the coordinates of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Sequencing Analysis^c Genomic Position^c
Range	Reference Sequence^c

has regularity code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasRegularityCode`
Description	coded information specifying the regularity of the concept
Super-properties	has code^op
Domain(s)	Heart Rate^c
Range	Terminology^c Code^c

has regulatory feature code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasRegulatoryFeatureCode`
Description	the regulatory feature related to the concept
Super-properties	has code^op
Domain(s)	Gene Fusion^c
Range	Terminology^c Code^c

has relative temporality code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasRelativeTemporalityCode`
Description	coded information describing when the concept occurred in relation to another event
Super-properties	has code^op
Domain(s)	Problem Condition^c
Range	Terminology^c Code^c

has resting point^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasRestingPoint`
Description	anatomical site of the end position
Super-properties	has body site^op
Domain(s)	Access Device Presence^c
Range	Body Site^c

has result^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasResult`
Description	evaluation outcome associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Lab Test^c Respiratory Rate Measurement^c Tumor Grade Assessment^c Microorganism Identification Lab Test^c Circumference Measurement^c Heart Rate Measurement^c Oxygen Saturation Measurement^c Tumor Stage Assessment^c Body Height Measurement^c Microbiology Biomolecule Presence Lab Test^c Blood Pressure Measurement^c Body Temperature Measurement^c Assessment Component^c Follow Up^c Cardiac Output Measurement^c Microbiology Microscopy Lab Test^c Antimicrobial Susceptibility Lab Test^c Assessment^c Measurement^c Body Weight Measurement^c
Range	Body Temperature^c Oxygen Saturation^c Result^c Vital Status^c Heart Rate^c Microbiology Microscopy Result^c Lab Result^c Assessment Result^c Microbiology Biomolecule Presence Result^c Body Height^c Body Weight^c Tumor Stage Assessment Result^c Microorganism Identification Result^c Blood Pressure^c Circumference^c Tumor Grade Assessment Result^c Respiratory Rate^c Cardiac Output^c Antimicrobial Susceptibility Result^c

has route code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasRouteCode`
Description	coded information specifying the route of the concept
Super-properties	has code^op
Domain(s)	Tobacco Exposure^c Exposure^c
Range	Terminology^c Code^c

has sample^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSample`
Description	sample associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Microbiology Microscopy Lab Test Event^c Assay^c Microorganism Identification Lab Test Event^c Lab Test Event^c Sequencing Assay^c Biobanksample^c Antimicrobial Susceptibility Lab Test Event^c Microbiology Biomolecule Presence Lab Test Event^c
Range	Isolate^c Sample^c

has sequence length^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSequenceLength`
Description	the length of the concept
Super-properties	has quantity^op
Domain(s)	Nucleotide Sequence^c
Range	Quantity^c

has sequencing instrument^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSequencingInstrument`
Description	device associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Sequencing Assay^c
Range	Sequencing Instrument^c

has sequencing run^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSequencingRun`
Description	sequencing run associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Sequencing Assay^c
Range	Sequencing Run^c

has severity code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSeverityCode`
Description	coded information specifying the severity of the concept
Super-properties	has code^op
Domain(s)	Allergy^c Adverse Event^c Allergy Episode^c
Range	Terminology^c Code^c

has software^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSoftware`
Description	software associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Sequencing Analysis^c Data Processing^c Medical Device^c Lab Analyzer^c Implant^c Access Device^c
Range	Software^c

has source data^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSourceData`
Description	source data associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Semantic Mapping^c
Range	Source Data^c

has source system^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSourceSystem`
Description	link to a source system
Super-properties	SPHN attribute object^op
Domain(s)	Time Series Data File^c Nursing Diagnosis^c Care Handling^c Allergy Episode^c Drug Article^c Library Preparation^c Insurance Status^c Nutrition Intake^c Sequencing Assay^c Follow Up^c Biobanksample^c Tobacco Exposure^c Tumor Grade Assessment Event^c Body Mass Index^c Resuscitation Directive^c Transplant Presence^c Tumor Stage Assessment Event^c Cardiac Output Measurement^c Organ Support^c Birth^c Cardiac Index^c Access Device Presence^c Data File^c Antimicrobial Susceptibility Lab Test Event^c Drug Prescription^c Fluid Input Output^c Microbiology Biomolecule Presence Lab Test Event^c Home Address^c Nationality^c Oncology Diagnosis^c Body Weight Measurement^c Sample Processing^c Tumor Specimen^c Death^c Billed Diagnosis^c Body Position^c Semantic Mapping^c Oxygen Administration Event^c Drug^c Civil Status^c Microbiology Microscopy Lab Test Event^c Consent^c Sequencing Analysis^c Interpretation^c Radiotherapy Procedure^c Substance^c Allergy^c Diagnosis^c Drug Administration Event^c Measurement^c Adverse Event^c Sample^c Problem Condition^c Oncology Surgery^c Exposure^c Electrocardiographic Procedure^c Body Height Measurement^c Imaging Procedure^c Reference Interpretation^c Respiratory Rate Measurement^c Body Surface Area^c Implant Presence^c Administrative Sex^c Assay^c Data Processing^c Fluid Balance^c Circumference Measurement^c Heart Rate Measurement^c Healthcare Encounter^c Oxygen Saturation Measurement^c Assessment Event^c Source Data^c Age^c Body Temperature Measurement^c Therapeutic Area^c Isolate^c Excluded Disorder^c Microorganism Identification Lab Test Event^c Variant Descriptor^c Administrative Case^c Gestational Age At Birth^c Blood Pressure Measurement^c Lab Test Event^c Medical Procedure^c Billed Procedure^c
Range	Source System^c

has specialty name^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSpecialtyName`
Description	name of professional health care specialization
Super-properties	SPHN attribute object^op
Domain(s)	Therapeutic Area^c
Range	SPHN Concept^c

has staining method code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasStainingMethodCode`
Description	coded information specifying the staining method associated to the concept
Super-properties	has code^op
Domain(s)	Microbiology Microscopy Lab Test^c
Range	Terminology^c Code^c

has staining result code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasStainingResultCode`
Description	coded information specifying the staining result associated to the concept
Super-properties	has code^op
Domain(s)	Microbiology Microscopy Result^c
Range	Terminology^c Code^c

has standard operating procedure^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasStandardOperatingProcedure`
Description	standard operating procedure associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Assay^c Data Processing^c Library Preparation^c Sequencing Assay^c Sample Processing^c Sequencing Analysis^c
Range	Standard Operating Procedure^c

has start cytoband code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasStartCytobandCode`
Description	coded information specifying the start cytoband of the concept
Super-properties	has code^op
Domain(s)	Chromosomal Location^c
Range	Terminology^c Code^c

has status code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasStatusCode`
Description	coded information specifying the status of the concept
Super-properties	has code^op
Domain(s)	Consent^c
Range	Terminology^c Code^c

has subject age^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSubjectAge`
Description	age of the individual at the time of the event
Super-properties	SPHN attribute object^op
Domain(s)	Oncology Diagnosis^c Diagnosis^c Billed Diagnosis^c Nursing Diagnosis^c
Range	Age^c

has subject physiologic state^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSubjectPhysiologicState`
Description	physiologic state of the subject
Super-properties	SPHN attribute object^op
Domain(s)	Electrocardiographic Procedure^c Heart Rate Measurement^c
Range	Physiologic State^c

has subject pseudo identifier^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSubjectPseudoIdentifier`
Description	link to a pseudo code assigned as unique identifier to an individual by a data provider institute
Super-properties	SPHN attribute object^op
Domain(s)	Biobanksample^c Tumor Grade Assessment Event^c Body Mass Index^c Resuscitation Directive^c Oncology Diagnosis^c Body Weight Measurement^c Sample Processing^c Death^c Body Position^c Cardiac Index^c Access Device Presence^c Microbiology Microscopy Lab Test Event^c Antimicrobial Susceptibility Lab Test Event^c Radiotherapy Procedure^c Microbiology Biomolecule Presence Lab Test Event^c Home Address^c Diagnosis^c Measurement^c Tumor Specimen^c Billed Diagnosis^c Sample^c Problem Condition^c Oncology Surgery^c Oxygen Administration Event^c Electrocardiographic Procedure^c Civil Status^c Respiratory Rate Measurement^c Body Surface Area^c Consent^c Sequencing Analysis^c Implant Presence^c Assay^c Allergy^c Fluid Balance^c Circumference Measurement^c Drug Administration Event^c Adverse Event^c Heart Rate Measurement^c Oxygen Saturation Measurement^c Assessment Event^c Exposure^c Body Height Measurement^c Imaging Procedure^c Isolate^c Administrative Sex^c Excluded Disorder^c Microorganism Identification Lab Test Event^c Data Processing^c Administrative Case^c Gestational Age At Birth^c Blood Pressure Measurement^c Medical Procedure^c Billed Procedure^c Healthcare Encounter^c Age^c Body Temperature Measurement^c Allergy Episode^c Library Preparation^c Insurance Status^c Nutrition Intake^c Sequencing Assay^c Variant Descriptor^c Follow Up^c Tobacco Exposure^c Lab Test Event^c Transplant Presence^c Tumor Stage Assessment Event^c Cardiac Output Measurement^c Organ Support^c Time Series Data File^c Birth^c Data File^c Nursing Diagnosis^c Drug Prescription^c Fluid Input Output^c Nationality^c
Range	Subject Pseudo Identifier^c

has substance^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSubstance`
Description	substance associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Fluid Input Output^c Nutrition Intake^c
Range	Substance^c

has swiss socio economic position^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSwissSocioEconomicPosition`
Description	area-based measure of socio-economic position (SEP) for Switzerland
Super-properties	SPHN attribute object^op
Domain(s)	Home Address^c
Range	Swiss Socio Economic Position^c

has systolic pressure^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasSystolicPressure`
Description	systolic pressure of the concept
Super-properties	has quantity^op
Domain(s)	Blood Pressure^c
Range	Quantity^c

has target enrichment kit code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTargetEnrichmentKitCode`
Description	coded information specifying the target enrichment kit associated to the concept
Super-properties	has code^op
Domain(s)	Library Preparation^c
Range	Terminology^c Code^c

has target location^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTargetLocation`
Description	physical location where the individual went to
Super-properties	has location^op
Domain(s)	Discharge^c Healthcare Encounter^c
Range	Location^c

has target molecule^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTargetMolecule`
Description	target molecule associated to the concept
Super-properties	SPHN attribute object^op
Domain(s)	Microbiology Biomolecule Presence Lab Test^c
Range	Gene^c Protein^c

has test kit^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTestKit`
Description	test kit used for the concept
Super-properties	SPHN attribute object^op
Domain(s)	Microbiology Microscopy Lab Test^c Lab Test^c Antimicrobial Susceptibility Lab Test^c Microorganism Identification Lab Test^c Microbiology Biomolecule Presence Lab Test^c
Range	Lab Analyzer^c

has therapeutic area^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTherapeuticArea`
Description	type of care provided
Super-properties	SPHN attribute object^op
Domain(s)	Healthcare Encounter^c
Range	Therapeutic Area^c

has time pattern^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTimePattern`
Description	type of repetitive sequence of events over time of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Drug Administration Event^c Drug Prescription^c
Range	Time Pattern^c

has time to positivity^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTimeToPositivity`
Description	time to positivity associated to the concept
Super-properties	has quantity^op
Domain(s)	Microorganism Identification Result^c
Range	Quantity^c

has total copy number^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTotalCopyNumber`
Description	total number of copies of the allele
Super-properties	has quantity^op
Domain(s)	Copy Number Variation^c
Range	Quantity^c

has transcript^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTranscript`
Description	RNA product of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Gene^c
Range	Transcript^c

has transplant^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTransplant`
Description	transplanted organ or tissue
Super-properties	SPHN attribute object^op
Domain(s)	Transplant Presence^c
Range	Transplant^c

has tumor purity^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTumorPurity`
Description	percentage of cancer cells in the sample
Super-properties	has quantity^op
Domain(s)	Tumor Specimen^c
Range	Quantity^c

has type code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasTypeCode`
Description	coded information specifying the type of the concept
Super-properties	has code^op
Domain(s)	Consent^c Location^c Time Pattern^c Medical Device^c Lab Analyzer^c Care Handling^c Variant Descriptor^c Tobacco Exposure^c Access Device^c Implant^c Copy Number Variation^c
Range	Terminology^c Code^c

has unit^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasUnit`
Description	unit of the concept
Super-properties	SPHN attribute object^op
Domain(s)	Quantity^c
Range	Unit^c

has upper limit^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasUpperLimit`
Description	top value of the concept
Super-properties	has quantity^op
Domain(s)	Range^c Reference Range^c
Range	Quantity^c

has verification status code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasVerificationStatusCode`
Description	coded information specifying the verification status of the concept
Super-properties	has code^op
Domain(s)	Allergy^c
Range	Terminology^c Code^c

has zygosity code^op # OPs

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasZygosityCode`
Description	coded information specifying the allelic state of the concept
Super-properties	has code^op
Domain(s)	Variant Descriptor^c
Range	Terminology^c Code^c

Named Individuals ↑

<
<=
>
>=
ASCII
Acid Citrate Dextrose
Addiction Medicine
Alcohol Based
Aldehyde Based
Aldehyde-Based Stabilizer For CTCs
Allergology And Clinical Immunology
Allprotect ® Tissue Reagent
Anaesthesiology
Angiology
Billing
Biobank
Cardiac And Thoracic Vascular Surgery
Cardiology
Case Report Form
Cell Preparation Tube® Citrate
Cell Preparation Tube® Heparin
Chemical Additives / Stabilizers
Child And Adolescent Psychiatry And Psychotherapy
Child And Adolescent Psychology
Chiropractic Specialist
Citrate Phosphate Dextrose
Clinical Data Platform
Clinical Pharmacology And Toxicology
Clinical Psychology
Clinical Registry
Cohort
Community Pharmacy
Company
Congenital Abnormality
Data Repository
Death
Dermatology And Venereology
Du Bois
EDTA And Gel
Endocrinology And Diabetology
Entire Cell
External Laboratory
Fatal
Federal Office
Foreign
Forensic Medicine
Gastroenterology
General
General Internal Medicine
General Medical Practitioner
General Medicine
Geriatric Medicine
Glass
Gynaecology And Obstetrics
Haematology
Hand Surgery
Health Insurance
Health Psychology
Healthcare Information System
Heat Stabilization
Hirudin
Hospital
Hospital Pharmacy
Hospitalisation Or Prolongation
ISO-8859-1
Infectology
Intensive Care Medicine
Inter-Residue Coordinates
Internal Medicine
Life-Threatening
Lithium Heparin
Lithium Heparin And Gel
Lithium Heparin And Rubber Plug
MD5
Medical Genetics
Medical Oncology
Mosteller
Multicellular
Nephrology
Neurology
Neuropsychology
Neurosurgery
Neutral Buffered Formalin
Non-Aldehyde-Based Stabilizer For Cell-Free Nucleic Acids
Nonaldehyde Based Without Acetic Acid
Nonaldehyde With Acetic Acid
Nonbuffered Formalin
None
None Of The Consequences Mentioned
Not Recovered
Nuclear Medicine
OMICS Facility
Occupational Medicine
Ophthalmology
Optimum Cutting Temperature Medium
Oragene Collection Container Or Equivalent
Oral And Maxillofacial Surgery
Oral Surgery
Orthodontics
Orthopaedic Surgery And Traumatology Of The Locomotor Apparatus
Other
Otorhinolaryngology
PAXgene Tissue
PAXgene® Blood DNA
PAXgene® Blood RNA+
PAXgene® Bone Marrow RNA
Paediatric Surgery
Paediatrics
Pathology
Patient Care
Periodontics
Permanent Damage Or Disability
Pharmaceutical Medicine
Pharmacy
Physical Filtration System
Physical Medicine And Rehabilitation
Plastic, Reconstructive And Aesthetic Surgery
Pneumology
Polyethylene Tube Sterile
Polypropylene Tube Sterile
Potassium EDTA
Prevention And Public Health
Private
Private Practice
Protease Inhibitors
Psychiatry And Psychotherapy
Psychotherapy
Quality Control
RNA Later
Radio-Oncology And Radiotherapy
Radiology
Reconstructive Dentistry
Recovered
Recovering
Recovering With Sequelae
Research
Research Laboratory
Research Organization
Residue Coordinates
Rheumatology
S8820 Protease Inhibitor Tablets Or Equivalent
SHA-256
SHA-512
Semi-Private
Serum Separator Tube With Clot Activator
Serum Tube Without Clot Activator
Service Provider
Snap Freezing
Sodium Citrate
Sodium EDTA
Sodium Fluoride/Potassium Oxalate
Sodium Heparin
Stool Collection Container With DNA Stabilizer
Surgery
Temporarily Serious Impact / Medically Important
Tempus® Tube
Thoracic Surgery
Trace Elements Tube
Tropical And Travel Medicine
UTF-16
UTF-8
Unicellular
University
Urology
Vacuum Technology Stabilization
Vascular Surgery
Visceral Medicine

ASCIIⁿⁱ

Class(es)

Data File encoding

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ASCII`

Acid Citrate Dextroseⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#AcidCitrateDextrose`

Addiction Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#AddictionMedicine`

Alcohol Basedⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#AlcoholBased`

Aldehyde Basedⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#AldehydeBased`

Aldehyde-Based Stabilizer For CTCsⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#AldehydeBasedStabilizerForCTCs`

Allergology And Clinical Immunologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#AllergologyAndClinicalImmunology`

Allprotect ® Tissue Reagentⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#AllprotectTissueReagent`

Anaesthesiologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Anaesthesiology`

Angiologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Angiology`

Billingⁿⁱ

Class(es)

Semantic Mapping purpose
Source System purpose

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Billing`

Biobankⁿⁱ

Class(es)

Source System category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Biobank`

Cardiac And Thoracic Vascular Surgeryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#CardiacAndThoracicVascularSurgery`

Cardiologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Cardiology`

Case Report Formⁿⁱ

Class(es)

Source System category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#CaseReportForm`

Cell Preparation Tube® Citrateⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#CellPreparationTubeCitrate`

Cell Preparation Tube® Heparinⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#CellPreparationTubeHeparin`

Chemical Additives / Stabilizersⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ChemicalAdditivesStabilizers`

Child And Adolescent Psychiatry And Psychotherapyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ChildAndAdolescentPsychiatryAndPsychotherapy`

Child And Adolescent Psychologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ChildAndAdolescentPsychology`

Chiropractic Specialistⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ChiropracticSpecialist`

Citrate Phosphate Dextroseⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#CitratePhosphateDextrose`

Clinical Data Platformⁿⁱ

Class(es)

Source System category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ClinicalDataPlatform`

Clinical Pharmacology And Toxicologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ClinicalPharmacologyAndToxicology`

Clinical Psychologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ClinicalPsychology`

Clinical Registryⁿⁱ

Class(es)

Source System category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ClinicalRegistry`

Cohortⁿⁱ

Class(es)

Source System category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Cohort`

Community Pharmacyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#CommunityPharmacy`

Companyⁿⁱ

Class(es)

Data Provider category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Company`

Congenital Abnormalityⁿⁱ

Class(es)

Adverse Event consequences

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#CongenitalAbnormality`

Data Repositoryⁿⁱ

Class(es)

Source System category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#DataRepository`

Deathⁿⁱ

Class(es)

Adverse Event consequences

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Death`

Dermatology And Venereologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#DermatologyAndVenereology`

Du Boisⁿⁱ

Class(es)

Body Surface Area calculation method

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#DuBois`

EDTA And Gelⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#EDTAAndGel`

Endocrinology And Diabetologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#EndocrinologyAndDiabetology`

Entire Cellⁿⁱ

Class(es)

Microbiology Microscopy Result cell organization

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#EntireCell`

External Laboratoryⁿⁱ

Class(es)

Data Provider category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ExternalLaboratory`

Fatalⁿⁱ

Class(es)

Adverse Event outcome

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Fatal`

Federal Officeⁿⁱ

Class(es)

Data Provider category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#FederalOffice`

Foreignⁿⁱ

Class(es)

Insurance Status coverage type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Foreign`

Forensic Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ForensicMedicine`

Gastroenterologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Gastroenterology`

Generalⁿⁱ

Class(es)

Insurance Status coverage type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#General`

General Internal Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#GeneralInternalMedicine`

General Medical Practitionerⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#GeneralMedicalPractitioner`

General Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#GeneralMedicine`

Geriatric Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#GeriatricMedicine`

Glassⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Glass`

>ⁿⁱ

Class(es)

Comparator

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#GreaterThan`

>=ⁿⁱ

Class(es)

Comparator

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#GreaterThanOrEqual`

Gynaecology And Obstetricsⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#GynaecologyAndObstetrics`

Haematologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Haematology`

Hand Surgeryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#HandSurgery`

Health Insuranceⁿⁱ

Class(es)

Data Provider category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#HealthInsurance`

Health Psychologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#HealthPsychology`

Healthcare Information Systemⁿⁱ

Class(es)

Source System category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#HealthcareInformationSystem`

Heat Stabilizationⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#HeatStabilization`

Hirudinⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Hirudin`

Hospitalⁿⁱ

Class(es)

Data Provider category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Hospital`

Hospital Pharmacyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#HospitalPharmacy`

Hospitalisation Or Prolongationⁿⁱ

Class(es)

Adverse Event consequences

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#HospitalisationOrProlongation`

ISO-8859-1ⁿⁱ

Class(es)

Data File encoding

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ISO88591`

Infectologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Infectology`

Intensive Care Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#IntensiveCareMedicine`

Inter-Residue Coordinatesⁿⁱ

Class(es)

Genomic Position coordinate convention

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#InterResidueCoordinates`

Internal Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#InternalMedicine`

<ⁿⁱ

Class(es)

Comparator

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#LessThan`

<=ⁿⁱ

Class(es)

Comparator

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#LessThanOrEqual`

Life-Threateningⁿⁱ

Class(es)

Adverse Event consequences

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#LifeThreatening`

Lithium Heparinⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#LithiumHeparin`

Lithium Heparin And Gelⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#LithiumHeparinAndGel`

Lithium Heparin And Rubber Plugⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#LithiumHeparinAndRubberPlug`

MD5ⁿⁱ

Class(es)

Hash algorithm

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#MD5`

Medical Geneticsⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#MedicalGenetics`

Medical Oncologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#MedicalOncology`

Mostellerⁿⁱ

Class(es)

Body Surface Area calculation method

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Mosteller`

Multicellularⁿⁱ

Class(es)

Microbiology Microscopy Result cell organization

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Multicellular`

Nephrologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Nephrology`

Neurologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Neurology`

Neuropsychologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Neuropsychology`

Neurosurgeryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Neurosurgery`

Neutral Buffered Formalinⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#NeutralBufferedFormalin`

Non-Aldehyde-Based Stabilizer For Cell-Free Nucleic Acidsⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#NonAldehydeBasedStabilizerForCellFreeNucleicAcids`

Nonaldehyde Based Without Acetic Acidⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#NonaldehydeBasedWithoutAceticAcid`

Nonaldehyde With Acetic Acidⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#NonaldehydeWithAceticAcid`

Nonbuffered Formalinⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#NonbufferedFormalin`

Noneⁿⁱ

Class(es)

Insurance Status coverage type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#None`

None Of The Consequences Mentionedⁿⁱ

Class(es)

Adverse Event consequences

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#NoneOfTheConsequencesMentioned`

Not Recoveredⁿⁱ

Class(es)

Adverse Event outcome

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#NotRecovered`

Nuclear Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#NuclearMedicine`

OMICS Facilityⁿⁱ

Class(es)

Source System category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#OMICSFacility`

Occupational Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#OccupationalMedicine`

Ophthalmologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Ophthalmology`

Optimum Cutting Temperature Mediumⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#OptimumCuttingTemperatureMedium`

Oragene Collection Container Or Equivalentⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#OrageneCollectionContainerOrEquivalent`

Oral And Maxillofacial Surgeryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#OralAndMaxillofacialSurgery`

Oral Surgeryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#OralSurgery`

Orthodonticsⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Orthodontics`

Orthopaedic Surgery And Traumatology Of The Locomotor Apparatusⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#OrthopaedicSurgeryAndTraumatologyOfTheLocomotorApparatus`

Otherⁿⁱ

Class(es)

Sample primary container
Insurance Status coverage type
Body Surface Area calculation method
Sample fixation type
Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Other`

Otorhinolaryngologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Otorhinolaryngology`

PAXgene® Blood DNAⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PAXgeneBloodDNA`

PAXgene® Blood RNA+ⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PAXgeneBloodRNAplus`

PAXgene® Bone Marrow RNAⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PAXgeneBoneMarrowRNA`

PAXgene Tissueⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PAXgeneTissue`

Paediatric Surgeryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PaediatricSurgery`

Paediatricsⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Paediatrics`

Pathologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Pathology`

Patient Careⁿⁱ

Class(es)

Source System purpose
Semantic Mapping purpose

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PatientCare`

Periodonticsⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Periodontics`

Permanent Damage Or Disabilityⁿⁱ

Class(es)

Adverse Event consequences

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PermanentDamageOrDisability`

Pharmaceutical Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PharmaceuticalMedicine`

Pharmacyⁿⁱ

Class(es)

Data Provider category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Pharmacy`

Physical Filtration Systemⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PhysicalFiltrationSystem`

Physical Medicine And Rehabilitationⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PhysicalMedicineAndRehabilitation`

Plastic, Reconstructive And Aesthetic Surgeryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PlasticReconstructiveAndAestheticSurgery`

Pneumologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Pneumology`

Polyethylene Tube Sterileⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PolyethyleneTubeSterile`

Polypropylene Tube Sterileⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PolypropyleneTubeSterile`

Potassium EDTAⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PotassiumEDTA`

Prevention And Public Healthⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PreventionAndPublicHealth`

Privateⁿⁱ

Class(es)

Insurance Status coverage type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Private`

Private Practiceⁿⁱ

Class(es)

Data Provider category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PrivatePractice`

Protease Inhibitorsⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ProteaseInhibitors`

Psychiatry And Psychotherapyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#PsychiatryAndPsychotherapy`

Psychotherapyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Psychotherapy`

Quality Controlⁿⁱ

Class(es)

Semantic Mapping purpose
Source System purpose

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#QualityControl`

RNA Laterⁿⁱ

Class(es)

Sample primary container
Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#RNALater`

Radio-Oncology And Radiotherapyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#RadioOncologyAndRadiotherapy`

Radiologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Radiology`

Reconstructive Dentistryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ReconstructiveDentistry`

Recoveredⁿⁱ

Class(es)

Adverse Event outcome

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Recovered`

Recoveringⁿⁱ

Class(es)

Adverse Event outcome

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Recovering`

Recovering With Sequelaeⁿⁱ

Class(es)

Adverse Event outcome

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#RecoveringWithSequelae`

Researchⁿⁱ

Class(es)

Semantic Mapping purpose
Source System purpose

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Research`

Research Laboratoryⁿⁱ

Class(es)

Source System category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ResearchLaboratory`

Research Organizationⁿⁱ

Class(es)

Data Provider category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ResearchOrganization`

Residue Coordinatesⁿⁱ

Class(es)

Genomic Position coordinate convention

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ResidueCoordinates`

Rheumatologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Rheumatology`

S8820 Protease Inhibitor Tablets Or Equivalentⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#S8820ProteaseInhibitorTabletsOrEquivalent`

SHA-256ⁿⁱ

Class(es)

Hash algorithm

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#SHA256`

SHA-512ⁿⁱ

Class(es)

Hash algorithm

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#SHA512`

Semi-Privateⁿⁱ

Class(es)

Insurance Status coverage type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#SemiPrivate`

Serum Separator Tube With Clot Activatorⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#SerumSeparatorTubeWithClotActivator`

Serum Tube Without Clot Activatorⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#SerumTubeWithoutClotActivator`

Service Providerⁿⁱ

Class(es)

Data Provider category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ServiceProvider`

Snap Freezingⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#SnapFreezing`

Sodium Citrateⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#SodiumCitrate`

Sodium EDTAⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#SodiumEDTA`

Sodium Fluoride/Potassium Oxalateⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#SodiumFluoridePotassiumOxalate`

Sodium Heparinⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#SodiumHeparin`

Stool Collection Container With DNA Stabilizerⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#StoolCollectionContainerWithDNAStabilizer`

Surgeryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Surgery`

Temporarily Serious Impact / Medically Importantⁿⁱ

Class(es)

Adverse Event consequences

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#TemporarilySeriousImpactMedicallyImportant`

Tempus® Tubeⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#TempusTube`

Thoracic Surgeryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#ThoracicSurgery`

Trace Elements Tubeⁿⁱ

Class(es)

Sample primary container

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#TraceElementsTube`

Tropical And Travel Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#TropicalAndTravelMedicine`

UTF-16ⁿⁱ

Class(es)

Data File encoding

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#UTF16`

UTF-8ⁿⁱ

Class(es)

Data File encoding

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#UTF8`

Unicellularⁿⁱ

Class(es)

Microbiology Microscopy Result cell organization

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Unicellular`

Universityⁿⁱ

Class(es)

Data Provider category

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#University`

Urologyⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#Urology`

Vacuum Technology Stabilizationⁿⁱ

Class(es)

Sample fixation type

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#VacuumTechnologyStabilization`

Vascular Surgeryⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#VascularSurgery`

Visceral Medicineⁿⁱ

Class(es)

Therapeutic Area specialty name

URI	`https://biomedit.ch/rdf/sphn-schema/sphn/individual#VisceralMedicine`

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#AdministrativeGender`
Description	Administrative Gender
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#Biosample`
Description	Biosample
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#Catheter`
Description	Catheter
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#CentralVenousPressure`
Description	Central Venous Pressure
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#CircumferenceMeasure`
Description	Circumference Measure
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#DataProviderInstitute`
Description	Data Provider Institute
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#DeathStatus`
Description	Death Status
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#DiagnosticRadiologicExamination`
Description	Diagnostic Radiologic Examination
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#FOPHDiagnosis`
Description	FOPH Diagnosis
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#FOPHProcedure`
Description	FOPH Procedure
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#GeneticVariation`
Description	Genetic Variation
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#ICDODiagnosis`
Description	ICD-O Diagnosis
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#InhaledOxygenConcentration`
Description	Inhaled Oxygen Concentration
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#MeasurementMethod`
Description	Measurement Method
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#Reference`
Description	Reference
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#SimpleScore`
Description	Simple Score
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#SystemicArterialBloodPressure`
Description	Systemic Arterial Blood Pressure
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#TNMClassification`
Description	TNM Classification
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#TumorGrade`
Description	Tumor Grade
Parents	Deprecated^c

URI	`https://biomedit.ch/rdf/sphn-ontology/sphn#TumorStage`
Description	Tumor Stage
Parents	Deprecated^c

The SPHN RDF Schema

Metadata

Description

Table of Contents

Schema Explorer↑

SPHN Schema Scope

Classes ↑

Access Device c # Classes

Access Device Presence c # Classes

Administrative Case c # Classes

Administrative Sex c # Classes

Admission c # Classes

Adverse Event c # Classes

Age c # Classes

Allergen c # Classes

Allergy c # Classes

Allergy Episode c # Classes

Antimicrobial Susceptibility Lab Test c # Classes

Antimicrobial Susceptibility Lab Test Event c # Classes

Antimicrobial Susceptibility Result c # Classes

Assay c # Classes

Assessment c # Classes

Assessment Component c # Classes

Assessment Event c # Classes

Assessment Result c # Classes

Billed Diagnosis c # Classes

Billed Procedure c # Classes

Biobanksample c # Classes

Birth c # Classes

Birth Date c # Classes

Blood Pressure c # Classes

Blood Pressure Measurement c # Classes

Body Height c # Classes

Body Height Measurement c # Classes

Body Mass Index c # Classes

Body Position c # Classes

Body Site c # Classes

Body Surface Area c # Classes

Body Temperature c # Classes

Body Temperature Measurement c # Classes

Body Weight c # Classes

Body Weight Measurement c # Classes

Cardiac Index c # Classes

Cardiac Output c # Classes

Cardiac Output Measurement c # Classes

Care Handling c # Classes

Chromosomal Location c # Classes

Chromosome c # Classes

Circumference c # Classes

Circumference Measurement c # Classes

Civil Status c # Classes

Code c # Classes

Consent c # Classes

Copy Number Variation c # Classes

Country c # Classes

Data Determination c # Classes

Data File c # Classes

Data Processing c # Classes

Data Provider c # Classes

Data Release c # Classes

Death c # Classes

Death Date c # Classes

Department c # Classes

Diagnosis c # Classes

Discharge c # Classes

Drug c # Classes

Drug Administration Event c # Classes

Drug Article c # Classes

Drug Prescription c # Classes

Electrocardiogram c # Classes

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Excluded Disorder c # Classes

Exposure c # Classes

Fluid Balance c # Classes

Fluid Input Output c # Classes

Follow Up c # Classes

Fraction Of Inspired Oxygen c # Classes

Gene c # Classes

Gene Fusion c # Classes

Gene Panel c # Classes

Access Device ^c # Classes

Access Device Presence ^c # Classes

Administrative Case ^c # Classes

Administrative Sex ^c # Classes

Admission ^c # Classes

Adverse Event ^c # Classes

Age ^c # Classes

Allergen ^c # Classes

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Antimicrobial Susceptibility Lab Test ^c # Classes

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Assay ^c # Classes

Assessment ^c # Classes

Assessment Component ^c # Classes

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Billed Diagnosis ^c # Classes

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Biobanksample ^c # Classes

Birth ^c # Classes

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Blood Pressure ^c # Classes

Blood Pressure Measurement ^c # Classes

Body Height ^c # Classes

Body Height Measurement ^c # Classes

Body Mass Index ^c # Classes

Body Position ^c # Classes

Body Site ^c # Classes

Body Surface Area ^c # Classes

Body Temperature ^c # Classes

Body Temperature Measurement ^c # Classes

Body Weight ^c # Classes

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Cardiac Index ^c # Classes

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Care Handling ^c # Classes

Chromosomal Location ^c # Classes

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Civil Status ^c # Classes

Code ^c # Classes

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Copy Number Variation ^c # Classes

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Death ^c # Classes

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Department ^c # Classes

Diagnosis ^c # Classes

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Drug ^c # Classes

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Drug Article ^c # Classes

Drug Prescription ^c # Classes

Electrocardiogram ^c # Classes

Electrocardiographic Procedure ^c # Classes

Excluded Disorder ^c # Classes

Exposure ^c # Classes

Fluid Balance ^c # Classes

Fluid Input Output ^c # Classes

Follow Up ^c # Classes

Fraction Of Inspired Oxygen ^c # Classes

Gene ^c # Classes

Gene Fusion ^c # Classes

Gene Panel ^c # Classes

Genomic Deletion ^c # Classes

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Genomic Translocation ^c # Classes

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Deprecated`
Description	Deprecated classes of SPHN that existed in the previous version
Children (Sub-classes)	Inhaled Oxygen Concentration^c Reference^c Tumor Grade^c Diagnostic Radiologic Examination^c Biosample^c TNM Classification^c Simple Score^c Death Status^c FOPH Diagnosis^c Systemic Arterial Blood Pressure^c ICD-O Diagnosis^c Central Venous Pressure^c Circumference Measure^c Tumor Stage^c Genetic Variation^c Catheter^c Measurement Method^c Administrative Gender^c Data Provider Institute^c FOPH Procedure^c

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#Comparator`
Description	qualifier describing whether the value is the precise one or not
Parents	Value Set^c
Value set members (Individuals)	> <= < >=

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#ValueSet`
Description	List of value sets provided by SPHN
Parents	SPHN Concept^c
Children (Sub-classes)	Data File encoding^c Semantic Mapping purpose^c Adverse Event outcome^c Microbiology Microscopy Result cell organization^c Sample fixation type^c Comparator^c Source System purpose^c Hash algorithm^c Body Surface Area calculation method^c Source System category^c Data Provider category^c Adverse Event consequences^c Insurance Status coverage type^c Therapeutic Area specialty name^c Sample primary container^c Genomic Position coordinate convention^c

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#SPHNAttributeDatatype`
Description	SPHN datatype attribute defined by the dataset

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasAlternateAllele`
Description	the alternate nucleotide of the concept
Super-properties	SPHN attribute datatype^dp
Domain(s)	Single Nucleotide Variation^c
Data type	xsd:string^c

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasBiobankName`
Description	name of the biobank where the sample is stored
Super-properties	has name^dp
Domain(s)	Biobanksample^c
Data type	xsd:string^c

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCodingSystemAndVersion`
Description	name and version of the coding system
Super-properties	SPHN attribute datatype^dp
Domain(s)	Variant Notation^c Code^c
Data type	xsd:string^c

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCollectionDateTime`
Description	datetime of collection of the concept
Super-properties	has datetime^dp
Domain(s)	Tumor Specimen^c Sample^c Isolate^c
Data type	xsd:dateTime^c

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasCreationDateTime`
Description	datetime the concept was created
Super-properties	has datetime^dp
Domain(s)	Data File^c Time Series Data File^c
Data type	xsd:dateTime^c

URI	`https://biomedit.ch/rdf/sphn-schema/sphn#hasDateTime`
Description	datetime of the concept
Super-properties	SPHN attribute datatype^dp
Domain(s)	Respiratory Rate^c Fraction Of Inspired Oxygen^c Cardiac Output^c Body Temperature^c Assessment Event^c Oxygen Saturation^c Microorganism Identification Lab Test Event^c Follow Up^c Lab Test Event^c Tumor Stage Assessment Event^c Sequencing Run^c Heart Rate^c Allergy Episode^c Tumor Grade Assessment Event^c Antimicrobial Susceptibility Lab Test Event^c Interpretation^c Admission^c Microbiology Biomolecule Presence Lab Test Event^c Body Height^c Circumference^c Body Weight^c Semantic Mapping^c Reference Interpretation^c Microbiology Microscopy Lab Test Event^c Discharge^c Consent^c Blood Pressure^c
Data type	xsd:dateTime^c